RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 RAD52P43351 418 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 CCL8P80075 99 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 PCGF3Q3KNV8 242 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 DEF8Q6ZN54 512 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 HDDC2Q7Z4H3 204 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 ICA1LQ8NDH6 482 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 RBM15BQ8NDT2 890 aaKnown RBP12.34□□□□□ -0.43
PAF1-202ENST00000416728 NOXO1Q8NFA2 376 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 OR1J2Q8NGS2 313 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 OR10A6Q8NH74 314 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 ZNF519Q8TB69 540 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 TSPEARQ8WU66 669 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 RASSF5Q8WWW0 418 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 STON2Q8WXE9 905 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 MCHR2Q969V1 340 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 THOC1Q96FV9 657 aaKnown RBP12.34□□□□□ -0.43
PAF1-202ENST00000416728 LRRC37BQ96QE4 947 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 TSPAN32Q96QS1 320 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 ZNF347Q96SE7 839 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 BCL2L14Q9BZR8 327 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 LRMDAQ9H2I8 198 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 INTS9Q9NV88 658 aaKnown RBP12.34□□□□□ -0.43
PAF1-202ENST00000416728 SLCO1C1Q9NYB5 712 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 CDC14BO60729 498 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 F13BP05160 661 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 ANPEPP15144 967 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 DAP3P51398 398 aaKnown RBP12.33□□□□□ -0.44
PAF1-202ENST00000416728 UCP2P55851 309 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 ERVS71-1P61550 626 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 LMO4P61968 165 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 MYBPC1Q00872 1141 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 RUNX1T1Q06455 604 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 RPL18Q07020 188 aaKnown RBP12.33□□□□□ -0.44
PAF1-202ENST00000416728 HIST3H3Q16695 136 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 MMEL1Q495T6 779 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 C12orf54Q6X4T0 127 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.33□□□□□ -0.44
PAF1-202ENST00000416728 SYT14Q8NB59 555 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 PRSS27Q9BQR3 290 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 MEPEQ9NQ76 525 aaPredicted RBP12.33□□□□□ -0.44
PAF1-202ENST00000416728 NKIRAS2Q9NYR9 191 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 NBEAL1Q6ZS30 2694 aa12.33□□□□□ -0.44
PAF1-202ENST00000416728 TRAV20A0A0B4J274 112 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 CENPBD1B2RD01 187 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 TPD52L2O43399 206 aaKnown RBP12.32□□□□□ -0.44
PAF1-202ENST00000416728 MGRN1O60291 552 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 VENTXO95231 258 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 MT-ND1P03886 318 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 MT-ND5P03915 603 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 ACADSP16219 412 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 DRD4P21917 467 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 APLNRP35414 380 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 TEKQ02763 1124 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 HSF2Q03933 536 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 MOGQ16653 247 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 VMACQ2NL98 169 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 TTMPQ5BVD1 217 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 FAHD2BQ6P2I3 314 aaPredicted RBP12.32□□□□□ -0.44
PAF1-202ENST00000416728 LRRC18Q8N456 261 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 TEX29Q8N6K0 151 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 ZFAND2BQ8WV99 257 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 ASB10Q8WXI3 467 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 FAHD2AQ96GK7 314 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 SEPHS2Q99611 448 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 MRPL13Q9BYD1 178 aaKnown RBP12.32□□□□□ -0.44
PAF1-202ENST00000416728 KCNN2Q9H2S1 579 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 NANOGQ9H9S0 305 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 INIPQ9NRY2 104 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 SH3GLB1Q9Y371 365 aa12.32□□□□□ -0.44
PAF1-202ENST00000416728 IGHV1-69-2A0A0G2JMI3 117 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 TRMUO75648 421 aaKnown RBP12.31□□□□□ -0.44
PAF1-202ENST00000416728 OR7A10O76100 309 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 PNPP00491 289 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 FUT1P19526 365 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 AQP2P41181 271 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 RBM34P42696 430 aaKnown RBP12.31□□□□□ -0.44
PAF1-202ENST00000416728 CRYBB2P43320 205 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 CRYBA2P53672 197 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 UGT2B15P54855 530 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 TAS2R41P59536 307 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 MVKQ03426 396 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 AVPI1Q5T686 147 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 ACSM5Q6NUN0 579 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 THSD4Q6ZMP0 1018 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 CCDC80Q76M96 950 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 SEMA6DQ8NFY4 1073 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 OR1J1Q8NGS3 322 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 PFN4Q8NHR9 129 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 ZNF418Q8TF45 676 aaPredicted RBP12.31□□□□□ -0.44
PAF1-202ENST00000416728 RAB39BQ96DA2 213 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 SGTBQ96EQ0 304 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 ZNF665Q9H7R5 613 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 SIAEQ9HAT2 523 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 CCNB1IP1Q9NPC3 277 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 DECR2Q9NUI1 292 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 STX18Q9P2W9 335 aaKnown RBP12.31□□□□□ -0.44
PAF1-202ENST00000416728 ANK2Q01484 3957 aa12.31□□□□□ -0.44
PAF1-202ENST00000416728 CLDN25C9JDP6 229 aa12.3□□□□□ -0.44
PAF1-202ENST00000416728 MMP7P09237 267 aaPredicted RBP12.3□□□□□ -0.44
PAF1-202ENST00000416728 CCNOP22674 350 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms