RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 B3GNT2Q9NY97 397 aa2.34□□□□□ -2.03
APP-207ENST00000415997 B3GAT1Q9P2W7 334 aa2.34□□□□□ -2.03
APP-207ENST00000415997 LCMT1Q9UIC8 334 aa2.34□□□□□ -2.03
APP-207ENST00000415997 FZR1Q9UM11 496 aa2.34□□□□□ -2.03
APP-207ENST00000415997 TSSC4Q9Y5U2 329 aaPredicted RBP2.34□□□□□ -2.03
APP-207ENST00000415997 MAD1L1Q9Y6D9 718 aa2.34□□□□□ -2.03
APP-207ENST00000415997 SORL1Q92673 2214 aa2.34□□□□□ -2.04
APP-207ENST00000415997 NUP214P35658 2090 aaPredicted RBP2.33□□□□□ -2.04
APP-207ENST00000415997 ERI2A8K979 691 aaKnown RBP2.33□□□□□ -2.04
APP-207ENST00000415997 SMTNL1A8MU46 457 aa2.33□□□□□ -2.04
APP-207ENST00000415997 H3BUX3 64 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SAP18O00422 153 aaKnown RBP2.33□□□□□ -2.04
APP-207ENST00000415997 PHYHO14832 338 aa2.33□□□□□ -2.04
APP-207ENST00000415997 DNPH1O43598 174 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SYNGR1O43759 233 aa2.33□□□□□ -2.04
APP-207ENST00000415997 ENSAO43768 121 aaKnown RBP2.33□□□□□ -2.04
APP-207ENST00000415997 PLOD3O60568 738 aa2.33□□□□□ -2.04
APP-207ENST00000415997 BCAS2O75934 225 aaPredicted RBP2.33□□□□□ -2.04
APP-207ENST00000415997 VAPBO95292 243 aa2.33□□□□□ -2.04
APP-207ENST00000415997 UTS2O95399 124 aa2.33□□□□□ -2.04
APP-207ENST00000415997 CLIC3O95833 236 aa2.33□□□□□ -2.04
APP-207ENST00000415997 IGKV1D-16P01601 117 aa2.33□□□□□ -2.04
APP-207ENST00000415997 IGHV3-13P01766 116 aa2.33□□□□□ -2.04
APP-207ENST00000415997 BCKDHAP12694 445 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SKILP12757 684 aa2.33□□□□□ -2.04
APP-207ENST00000415997 NMBRP28336 390 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SERPINB1P30740 379 aa2.33□□□□□ -2.04
APP-207ENST00000415997 KRT20P35900 424 aa2.33□□□□□ -2.04
APP-207ENST00000415997 MDH2P40926 338 aaKnown RBP2.33□□□□□ -2.04
APP-207ENST00000415997 GPX6P59796 221 aa2.33□□□□□ -2.04
APP-207ENST00000415997 UBE2NP61088 152 aaKnown RBP2.33□□□□□ -2.04
APP-207ENST00000415997 RPS16P62249 146 aaKnown RBP2.33□□□□□ -2.04
APP-207ENST00000415997 GNB2P62879 340 aa2.33□□□□□ -2.04
APP-207ENST00000415997 CRADDP78560 199 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SARNPP82979 210 aaKnown RBP2.33□□□□□ -2.04
APP-207ENST00000415997 CDKL1Q00532 357 aa2.33□□□□□ -2.04
APP-207ENST00000415997 MFGE8Q08431 387 aaPredicted RBP2.33□□□□□ -2.04
APP-207ENST00000415997 SLC17A1Q14916 467 aa2.33□□□□□ -2.04
APP-207ENST00000415997 OASLQ15646 514 aaKnown RBP2.33□□□□□ -2.04
APP-207ENST00000415997 LTB4RQ15722 352 aa2.33□□□□□ -2.04
APP-207ENST00000415997 NPTX1Q15818 432 aa2.33□□□□□ -2.04
APP-207ENST00000415997 AANATQ16613 207 aa2.33□□□□□ -2.04
APP-207ENST00000415997 TSTQ16762 297 aaKnown RBP2.33□□□□□ -2.04
APP-207ENST00000415997 ZNF718Q3SXZ3 478 aa2.33□□□□□ -2.04
APP-207ENST00000415997 ATP6AP1LQ52LC2 224 aa2.33□□□□□ -2.04
APP-207ENST00000415997 HSP90AA4PQ58FG1 418 aa2.33□□□□□ -2.04
APP-207ENST00000415997 TTMPQ5BVD1 217 aa2.33□□□□□ -2.04
APP-207ENST00000415997 RNLSQ5VYX0 342 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SLC48A1Q6P1K1 146 aa2.33□□□□□ -2.04
APP-207ENST00000415997 CASP12Q6UXS9 341 aa2.33□□□□□ -2.04
APP-207ENST00000415997 RNF165Q6ZSG1 346 aa2.33□□□□□ -2.04
APP-207ENST00000415997 TMPPEQ6ZT21 453 aa2.33□□□□□ -2.04
APP-207ENST00000415997 CCDC121Q6ZUS5 278 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SDCCAG8Q86SQ7 713 aaPredicted RBP2.33□□□□□ -2.04
APP-207ENST00000415997 MDP1Q86V88 176 aa2.33□□□□□ -2.04
APP-207ENST00000415997 CCDC50Q8IVM0 306 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SLC44A2Q8IWA5 706 aaPredicted RBP2.33□□□□□ -2.04
APP-207ENST00000415997 LAS2Q8IYD9 372 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SCAIQ8N9R8 606 aa2.33□□□□□ -2.04
APP-207ENST00000415997 ZBTB34Q8NCN2 500 aa2.33□□□□□ -2.04
APP-207ENST00000415997 OR5AU1Q8NGC0 362 aa2.33□□□□□ -2.04
APP-207ENST00000415997 OR4C3Q8NH37 302 aa2.33□□□□□ -2.04
APP-207ENST00000415997 PIGXQ8TBF5 258 aa2.33□□□□□ -2.04
APP-207ENST00000415997 LHX4Q969G2 390 aa2.33□□□□□ -2.04
APP-207ENST00000415997 MYDGFQ969H8 173 aa2.33□□□□□ -2.04
APP-207ENST00000415997 HAUS1Q96CS2 278 aa2.33□□□□□ -2.04
APP-207ENST00000415997 CCDC126Q96EE4 140 aa2.33□□□□□ -2.04
APP-207ENST00000415997 PHF21BQ96EK2 531 aa2.33□□□□□ -2.04
APP-207ENST00000415997 CNRIP1Q96F85 164 aaPredicted RBP2.33□□□□□ -2.04
APP-207ENST00000415997 CMTM7Q96FZ5 175 aa2.33□□□□□ -2.04
APP-207ENST00000415997 BBS4Q96RK4 519 aa2.33□□□□□ -2.04
APP-207ENST00000415997 ERGIC2Q96RQ1 377 aa2.33□□□□□ -2.04
APP-207ENST00000415997 EFCAB11Q9BUY7 163 aa2.33□□□□□ -2.04
APP-207ENST00000415997 KIFC1Q9BW19 673 aa2.33□□□□□ -2.04
APP-207ENST00000415997 CDCA4Q9BXL8 241 aa2.33□□□□□ -2.04
APP-207ENST00000415997 TBL1XR1Q9BZK7 514 aa2.33□□□□□ -2.04
APP-207ENST00000415997 NMUR2Q9GZQ4 415 aa2.33□□□□□ -2.04
APP-207ENST00000415997 NPFFR1Q9GZQ6 430 aa2.33□□□□□ -2.04
APP-207ENST00000415997 OR51B5Q9H339 312 aa2.33□□□□□ -2.04
APP-207ENST00000415997 CNOT10Q9H9A5 744 aaKnown RBP2.33□□□□□ -2.04
APP-207ENST00000415997 HHATLQ9HCP6 504 aa2.33□□□□□ -2.04
APP-207ENST00000415997 RAB18Q9NP72 206 aa2.33□□□□□ -2.04
APP-207ENST00000415997 A4GALTQ9NPC4 353 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SLCO1C1Q9NYB5 712 aa2.33□□□□□ -2.04
APP-207ENST00000415997 TAB2Q9NYJ8 693 aa2.33□□□□□ -2.04
APP-207ENST00000415997 TAAR3PQ9P1P4 343 aa2.33□□□□□ -2.04
APP-207ENST00000415997 UVRAGQ9P2Y5 699 aa2.33□□□□□ -2.04
APP-207ENST00000415997 UPB1Q9UBR1 384 aa2.33□□□□□ -2.04
APP-207ENST00000415997 FBXO5Q9UKT4 447 aa2.33□□□□□ -2.04
APP-207ENST00000415997 SLC9A8Q9Y2E8 581 aa2.33□□□□□ -2.04
APP-207ENST00000415997 COMMD10Q9Y6G5 202 aa2.33□□□□□ -2.04
APP-207ENST00000415997 LRP1Q07954 4544 aaKnown RBP2.32□□□□□ -2.04
APP-207ENST00000415997 A0A1W2PQD3 144 aa2.32□□□□□ -2.04
APP-207ENST00000415997 ZSCAN5BA6NJL1 495 aa2.32□□□□□ -2.04
APP-207ENST00000415997 LRRC53A6NM62 1247 aa2.32□□□□□ -2.04
APP-207ENST00000415997 AKR1B15C9JRZ8 316 aaPredicted RBP2.32□□□□□ -2.04
APP-207ENST00000415997 RPL36A-HNRNPH2H7BZ11 118 aa2.32□□□□□ -2.04
APP-207ENST00000415997 H7C0C1 242 aa2.32□□□□□ -2.04
APP-207ENST00000415997 PSMD3O43242 534 aa2.32□□□□□ -2.04
APP-207ENST00000415997 ZNF500O60304 480 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms