RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 OR4K5Q8NGD3 323 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 C22orf15Q8WYQ4 148 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 POP5Q969H6 163 aaKnown RBP13.06□□□□□ -0.32
DDX56-202ENST00000415758 ELMOD3Q96FG2 381 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 RNF121Q9H920 327 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 ZMAT3Q9HA38 289 aaKnown RBP13.06□□□□□ -0.32
DDX56-202ENST00000415758 IQCMA0A1B0GVH7 501 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 TPD52L2O43399 206 aaKnown RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 SERPINB7O75635 380 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 ADH4P08319 380 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 MMP7P09237 267 aaPredicted RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 QDPRP09417 244 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 DRD4P21917 467 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 MRPL19P49406 292 aaKnown RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 ZNF81P51508 661 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 WDR4P57081 412 aaKnown RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 PLP2Q04941 152 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 SLC3A1Q07837 685 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 ZNF74Q16587 644 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 TSTQ16762 297 aaKnown RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 WDR93Q6P2C0 686 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 RBMS3Q6XE24 437 aaKnown RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 MAVSQ7Z434 540 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 RANBP3LQ86VV4 465 aaPredicted RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 SYT14Q8NB59 555 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 CCL17Q92583 94 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 GTF3AQ92664 365 aaKnown RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 OR52B2Q96RD2 323 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 ZNF607Q96SK3 696 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 GPA33Q99795 319 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 GAL3ST1Q99999 423 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 PAIP2Q9BPZ3 127 aaKnown RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 OR51B6Q9H340 312 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 TMEM38AQ9H6F2 299 aa13.05□□□□□ -0.32
DDX56-202ENST00000415758 LEF1Q9UJU2 399 aaPredicted RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 POLR3KQ9Y2Y1 108 aaPredicted RBP13.05□□□□□ -0.32
DDX56-202ENST00000415758 TANC2Q9HCD6 1990 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 POM121CA8CG34 1229 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 CHP2O43745 196 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 FOXH1O75593 365 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 IGHV1-46P01743 117 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 GPX2P18283 190 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 MAKP20794 623 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 PPIBP23284 216 aaKnown RBP13.04□□□□□ -0.32
DDX56-202ENST00000415758 SLC6A2P23975 617 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 ZFP36P26651 326 aaKnown RBP13.04□□□□□ -0.32
DDX56-202ENST00000415758 LCN2P80188 198 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 DEFA6Q01524 100 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 TREML4Q6UXN2 200 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 LRRC17Q8N6Y2 441 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 SIGLECL1Q8N7X8 197 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 RBM15BQ8NDT2 890 aaKnown RBP13.04□□□□□ -0.32
DDX56-202ENST00000415758 CPEB3Q8NE35 698 aaKnown RBP13.04□□□□□ -0.32
DDX56-202ENST00000415758 DEFB108BQ8NET1 73 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 OR1J1Q8NGS3 322 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 MCHR2Q969V1 340 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 C1orf147Q96MC9 270 aaPredicted RBP13.04□□□□□ -0.32
DDX56-202ENST00000415758 SEPHS2Q99611 448 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 MRPL13Q9BYD1 178 aaKnown RBP13.04□□□□□ -0.32
DDX56-202ENST00000415758 SLCO1B3Q9NPD5 702 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 NANSQ9NR45 359 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 PLEK2Q9NYT0 353 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 SLAMF8Q9P0V8 285 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 KLHL21Q9UJP4 597 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 SLC13A4Q9UKG4 626 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 NUP50Q9UKX7 468 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 TRIM33Q9UPN9 1127 aa13.04□□□□□ -0.32
DDX56-202ENST00000415758 TRBV5-3A0A0A0MS03 114 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 CENPBD1B2RD01 187 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 RNF13O43567 381 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 APLNRP35414 380 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 LIPAP38571 399 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 ATP4BP51164 291 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 ZNF133P52736 654 aaPredicted RBP13.03□□□□□ -0.32
DDX56-202ENST00000415758 SCARB2Q14108 478 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 ZNF718Q3SXZ3 478 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 ARMC8Q8IUR7 673 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 C1orf174Q8IYL3 243 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 ST7LQ8TDW4 575 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 MARS2Q96GW9 593 aaKnown RBP13.03□□□□□ -0.32
DDX56-202ENST00000415758 MCHR1Q99705 422 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 EGLN1Q9GZT9 426 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 VAPAQ9P0L0 249 aa13.03□□□□□ -0.32
DDX56-202ENST00000415758 PURGQ9UJV8 347 aaKnown RBP13.03□□□□□ -0.32
DDX56-202ENST00000415758 DNAJC9-AS1A6NH13 148 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 CLDN34H7C241 214 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 SPRY3O43610 288 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 LYPD3O95274 346 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 CH25HO95992 272 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 IGHG1P01857 330 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 ASAH2BP0C7U1 165 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 ZNF84P51523 738 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 IL13RA1P78552 427 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 MELKQ14680 651 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 OCLNQ16625 522 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 TMEM255AQ5JRV8 349 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 KLF17Q5JT82 389 aaPredicted RBP13.02□□□□□ -0.33
DDX56-202ENST00000415758 MBNL2Q5VZF2 373 aaKnown RBP13.02□□□□□ -0.33
DDX56-202ENST00000415758 BLOC1S3Q6QNY0 202 aa13.02□□□□□ -0.33
DDX56-202ENST00000415758 UNQ6126/PRO20091Q6UXV3 157 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms