RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 ING1Q9UK53 422 aaPredicted RBP12.29□□□□□ -0.44
SNHG17-202ENST00000414142 DKKL1Q9UK85 242 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 MED12Q93074 2177 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 A0A1W2PPK0 400 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 C21orf140B9A014 251 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 SC5DO75845 299 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 P04436 131 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 FKBP2P26885 142 aaKnown RBP12.29□□□□□ -0.44
SNHG17-202ENST00000414142 DSCR4P56555 118 aaPredicted RBP12.29□□□□□ -0.44
SNHG17-202ENST00000414142 IDNKQ5T6J7 187 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 LIPNQ5VXI9 398 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 TIGD3Q6B0B8 471 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 HBMQ6B0K9 141 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 ZNF544Q6NX49 715 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 SPATC1Q76KD6 591 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 UBQLNLQ8IYU4 475 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 GTPBP8Q8N3Z3 284 aaPredicted RBP12.29□□□□□ -0.44
SNHG17-202ENST00000414142 OTOSQ8NHW6 89 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 KCNG2Q9UJ96 466 aa12.29□□□□□ -0.44
SNHG17-202ENST00000414142 COA3Q9Y2R0 106 aaPredicted RBP12.29□□□□□ -0.44
SNHG17-202ENST00000414142 CACNA1CQ13936 2221 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 AHCTF1Q8WYP5 2266 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 FREM3P0C091 2139 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 NPIPB13A6NJU9 1138 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 NPIPB4C9JG80 1138 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 SSX4O60224 188 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 GPRIN2O60269 458 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 RAD1O60671 282 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 SPARCP09486 303 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 SLC2A2P11168 524 aaPredicted RBP12.28□□□□□ -0.44
SNHG17-202ENST00000414142 NUBP1P53384 320 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 BIDP55957 195 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 NANOS3P60323 173 aaKnown RBP12.28□□□□□ -0.44
SNHG17-202ENST00000414142 ADAM8P78325 824 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 GLO1Q04760 184 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 EGR3Q06889 387 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 TOMM20Q15388 145 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 TAB1Q15750 504 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 CSRP2Q16527 193 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 ACER2Q5QJU3 275 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 RAET1LQ5VY80 246 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 FAM205BPQ63HN1 556 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 TMEM225Q6GV28 225 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 H3F3CQ6NXT2 135 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 DNM1P34Q6PK57 102 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 NCCRP1Q6ZVX7 275 aaPredicted RBP12.28□□□□□ -0.44
SNHG17-202ENST00000414142 UEVLDQ8IX04 471 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
SNHG17-202ENST00000414142 C19orf18Q8NEA5 215 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 THOC3Q96J01 351 aaKnown RBP12.28□□□□□ -0.44
SNHG17-202ENST00000414142 SMAD5Q99717 465 aaKnown RBP12.28□□□□□ -0.44
SNHG17-202ENST00000414142 TMEM165Q9HC07 324 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 PARD6AQ9NPB6 346 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 RYDENQ9NUL5 291 aaKnown RBP12.28□□□□□ -0.44
SNHG17-202ENST00000414142 HDGFL3Q9Y3E1 203 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 MRPS18BQ9Y676 258 aaKnown RBP12.28□□□□□ -0.44
SNHG17-202ENST00000414142 DOCK10Q96BY6 2186 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 A0A1W2PNV4 684 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 CENPBD1B2RD01 187 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 SULT2B1O00204 365 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 UPK3AO75631 287 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 ARL6IP5O75915 188 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 HLA-DQB1P01920 261 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 APEX1P27695 318 aaKnown RBP12.28□□□□□ -0.44
SNHG17-202ENST00000414142 CARTPTQ16568 116 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 TRIQKQ629K1 86 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 SLC18B1Q6NT16 456 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 LRRC69Q6ZNQ3 347 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 GPAT4Q86UL3 456 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 Q8N402 240 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 HAVCR2Q8TDQ0 301 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 NSMAFQ92636 917 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 NEDD4LQ96PU5 975 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 KCNK17Q96T54 332 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 TTYH2Q9BSA4 534 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 EMC6Q9BV81 110 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 MRPL22Q9NWU5 206 aaKnown RBP12.28□□□□□ -0.44
SNHG17-202ENST00000414142 ZNF281Q9Y2X9 895 aa12.28□□□□□ -0.44
SNHG17-202ENST00000414142 ZNF318Q5VUA4 2279 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 LOC101059948A0A1B0GTJ6 334 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 ZIC3O60481 467 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 CBR3O75828 277 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 GATBO75879 557 aaKnown RBP12.27□□□□□ -0.45
SNHG17-202ENST00000414142 PSKH1P11801 424 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 DNASE1L1P49184 302 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 RPS11P62280 158 aaKnown RBP eCLIP12.27□□□□□ -0.45
SNHG17-202ENST00000414142 SLC35A1P78382 337 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 OC90Q02509 493 aaPredicted RBP12.27□□□□□ -0.45
SNHG17-202ENST00000414142 FMODQ06828 376 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 MRPL28Q13084 256 aaKnown RBP12.27□□□□□ -0.45
SNHG17-202ENST00000414142 ALKBH1Q13686 389 aaKnown RBP12.27□□□□□ -0.45
SNHG17-202ENST00000414142 IL18Q14116 193 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 MEP1BQ16820 701 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 NR2C2APQ86WQ0 139 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 WDFY1Q8IWB7 410 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 BEST3Q8N1M1 668 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 ADPRHL1Q8NDY3 354 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 ASB17Q8WXJ9 295 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 HSD17B8Q92506 261 aa12.27□□□□□ -0.45
SNHG17-202ENST00000414142 NTNG2Q96CW9 530 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms