RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 HTR3EA5X5Y0 456 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 CENPBD1B2RD01 187 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 FARS2O95363 451 aaKnown RBP22.7■■□□□ 1.22
VEGFA-207ENST00000413642 SERPINA5P05154 406 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 IGFBP1P08833 259 aaPredicted RBP22.7■■□□□ 1.22
VEGFA-207ENST00000413642 CCL2P13500 99 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 ZNF26P17031 533 aaPredicted RBP22.7■■□□□ 1.22
VEGFA-207ENST00000413642 ZNF84P51523 738 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 ZNF133P52736 654 aaPredicted RBP22.7■■□□□ 1.22
VEGFA-207ENST00000413642 DSCR9P59020 149 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 RPL27P61353 136 aaKnown RBP22.7■■□□□ 1.22
VEGFA-207ENST00000413642 C10orf128Q5T292 105 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 SLC16A14Q7RTX9 510 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 HDDC2Q7Z4H3 204 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 CYP4Z1Q86W10 505 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 RNF113BQ8IZP6 322 aaKnown RBP22.7■■□□□ 1.22
VEGFA-207ENST00000413642 LRRC18Q8N456 261 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 SLC7A13Q8TCU3 470 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 C7orf34Q96L11 122 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 LRRC37BQ96QE4 947 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 CDRT15Q96T59 188 aa22.7■■□□□ 1.22
VEGFA-207ENST00000413642 DENND2DQ9H6A0 471 aaPredicted RBP22.7■■□□□ 1.22
VEGFA-207ENST00000413642 NPIPB13A6NJU9 1138 aa22.69■■□□□ 1.22
VEGFA-207ENST00000413642 NPIPB4C9JG80 1138 aa22.69■■□□□ 1.22
VEGFA-207ENST00000413642 H1F0P07305 194 aaKnown RBP22.69■■□□□ 1.22
VEGFA-207ENST00000413642 VLDLRP98155 873 aa22.69■■□□□ 1.22
VEGFA-207ENST00000413642 CD47Q08722 323 aa22.69■■□□□ 1.22
VEGFA-207ENST00000413642 SLC25A47Q6Q0C1 308 aa22.69■■□□□ 1.22
VEGFA-207ENST00000413642 PGAM4Q8N0Y7 254 aa22.69■■□□□ 1.22
VEGFA-207ENST00000413642 PAQR4Q8N4S7 273 aaPredicted RBP22.69■■□□□ 1.22
VEGFA-207ENST00000413642 MRPL37Q9BZE1 423 aaKnown RBP22.69■■□□□ 1.22
VEGFA-207ENST00000413642 CD300AQ9UGN4 299 aa22.69■■□□□ 1.22
VEGFA-207ENST00000413642 VSTM5A8MXK1 200 aa22.68■■□□□ 1.22
VEGFA-207ENST00000413642 IGHMP01871 453 aa22.68■■□□□ 1.22
VEGFA-207ENST00000413642 ERVK-25P63136 954 aa22.68■■□□□ 1.22
VEGFA-207ENST00000413642 TMPRSS11FQ6ZWK6 438 aa22.68■■□□□ 1.22
VEGFA-207ENST00000413642 ZNF519Q8TB69 540 aa22.68■■□□□ 1.22
VEGFA-207ENST00000413642 NABP1Q96AH0 204 aa22.68■■□□□ 1.22
VEGFA-207ENST00000413642 FAM46AQ96IP4 442 aaKnown RBP22.68■■□□□ 1.22
VEGFA-207ENST00000413642 STX18Q9P2W9 335 aaKnown RBP22.68■■□□□ 1.22
VEGFA-207ENST00000413642 FZR1Q9UM11 496 aa22.68■■□□□ 1.22
VEGFA-207ENST00000413642 SAMD4AQ9UPU9 718 aaKnown RBP22.68■■□□□ 1.22
VEGFA-207ENST00000413642 FAM32AQ9Y421 112 aaKnown RBP22.68■■□□□ 1.22
VEGFA-207ENST00000413642 CMAHPQ9Y471 501 aa22.68■■□□□ 1.22
VEGFA-207ENST00000413642 TRBV4-1A0A0J9YWV2 114 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 H7C1C5 153 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 GMNNO75496 209 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 MMP7P09237 267 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-207ENST00000413642 HSD17B1P14061 328 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 PPOXP50336 477 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 LCN6P62502 163 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 MRPS34P82930 218 aaKnown RBP22.67■■□□□ 1.22
VEGFA-207ENST00000413642 SEC23BQ15437 767 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 TAF11Q15544 211 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 CARTPTQ16568 116 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 SGCAQ16586 387 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 FXNQ16595 210 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 SLC36A2Q495M3 483 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 IQCCQ4KMZ1 466 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 FGD3Q5JSP0 725 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 GKAP1Q5VSY0 366 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-207ENST00000413642 TMEM53Q6P2H8 277 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 RRM2BQ7LG56 351 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 LRP11Q86VZ4 500 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 SLC30A7Q8NEW0 376 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 MRPL24Q96A35 216 aaKnown RBP22.67■■□□□ 1.22
VEGFA-207ENST00000413642 ANKRD19PQ9H560 264 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 GORASP2Q9H8Y8 452 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 ADAM18Q9Y3Q7 739 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 FKBP7Q9Y680 259 aa22.67■■□□□ 1.22
VEGFA-207ENST00000413642 DCTN3O75935 186 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 RHCEP18577 417 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 GLRXP35754 106 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 SLC9A3P48764 834 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 GALK2Q01415 458 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 KRTAP21-3Q3LHN1 58 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 OR52J3Q8NH60 311 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 CCT8L2Q96SF2 557 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 SYT3Q9BQG1 590 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 ALG12Q9BV10 488 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 OR51B6Q9H340 312 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 SIAEQ9HAT2 523 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 SMURF2Q9HAU4 748 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 FBXL3Q9UKT7 428 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 SPEF1Q9Y4P9 236 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 NIPBLQ6KC79 2804 aaeCLIP22.66■■□□□ 1.222e-6■■□□□ 11.5
VEGFA-207ENST00000413642 ZANQ9Y493 2812 aa22.66■■□□□ 1.22
VEGFA-207ENST00000413642 A0A1W2PRQ8 180 aa22.65■■□□□ 1.22
VEGFA-207ENST00000413642 ENTPD5O75356 428 aa22.65■■□□□ 1.22
VEGFA-207ENST00000413642 SEMG1P04279 462 aa22.65■■□□□ 1.22
VEGFA-207ENST00000413642 ADRA2AP08913 450 aa22.65■■□□□ 1.22
VEGFA-207ENST00000413642 FAM157BP0CG42 384 aa22.65■■□□□ 1.22
VEGFA-207ENST00000413642 SLC25A16P16260 332 aa22.65■■□□□ 1.22
VEGFA-207ENST00000413642 RPL4P36578 427 aaKnown RBP22.65■■□□□ 1.22
VEGFA-207ENST00000413642 PDLIM4P50479 330 aa22.65■■□□□ 1.22
VEGFA-207ENST00000413642 DGCR6Q14129 220 aa22.65■■□□□ 1.22
VEGFA-207ENST00000413642 NRN1LQ496H8 165 aa22.65■■□□□ 1.22
VEGFA-207ENST00000413642 ZBED5Q49AG3 693 aa22.65■■□□□ 1.22
VEGFA-207ENST00000413642 SAMD4BQ5PRF9 694 aaKnown RBP22.65■■□□□ 1.22
VEGFA-207ENST00000413642 DEFB107AQ8IZN7 70 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms