RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 LOC100509620A0A075B734 347 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TMEM265A0A087WTH1 108 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TBC1D3DA0A087WVF3 549 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TBC1D3IA0A087WXS9 549 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TBC1D3LB9A6J9 549 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ADAM11O75078 769 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TMEM127O75204 238 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 HLA-AP01891 365 aaKnown RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 TBC1D3HP0C7X1 549 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 CPMP14384 443 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TSFMP43897 325 aaKnown RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 EMDP50402 254 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 IRF4Q15306 451 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ZNF528Q3MIS6 628 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TMEM196Q5HYL7 178 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ARHGAP40Q5TG30 622 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 NKAIN2Q5VXU1 208 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TBC1D3CQ6IPX1 549 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ENPP7Q6UWV6 458 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TBC1D3Q8IZP1 549 aaPredicted RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 ARMC10Q8N2F6 343 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 MFSD9Q8NBP5 474 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 OR51A4Q8NGJ6 313 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 OR5M8Q8NGP6 311 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 NANPQ8TBE9 248 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 PPP1R1CQ8WVI7 109 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TSEN15Q8WW01 171 aaKnown RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 GAL3ST3Q96A11 431 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 RAB11FIP5Q9BXF6 653 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 COMMD4Q9H0A8 199 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 GAREM1Q9H706 876 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 SLC22A11Q9NSA0 550 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 MKL2Q9ULH7 1088 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 KLHDC2Q9Y2U9 406 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 PQLC2LA1A4F0 135 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 DNAJB6O75190 326 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ITGB2P05107 769 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 DRD1P21728 446 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TLX1P31314 330 aaPredicted RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 CSF2RBP32927 897 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 DRD3P35462 400 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 CD96P40200 585 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 RPS27P42677 84 aaKnown RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 CAPZA1P52907 286 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ATP1B3P54709 279 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ACTBP60709 375 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ACTG1P63261 375 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ZNF345Q14585 488 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 AVPI1Q5T686 147 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ADAMTSL4Q6UY14 1074 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 DNM1P46Q6ZS02 220 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 RNF44Q7L0R7 432 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ZNF627Q7L945 461 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TMEFF1Q8IYR6 380 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 SAMD14Q8IZD0 417 aaPredicted RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 GTPBP8Q8N3Z3 284 aaPredicted RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 CDRT4Q8N9R6 151 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 CCDC74AQ96AQ1 378 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 PHYHIPLQ96FC7 376 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 LRFN5Q96NI6 719 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 TINAGL1Q9GZM7 467 aaPredicted RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 PRO3102Q9H379 93 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 C8orf33Q9H7E9 229 aaPredicted RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 MBD2Q9UBB5 411 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 SERGEFQ9UGK8 458 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 GTF2A1LQ9UNN4 478 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 LHX6Q9UPM6 363 aa8.1□□□□□ -1.11
SIK3-202ENST00000413553 ARID1BQ8NFD5 2236 aaPredicted RBP8.1□□□□□ -1.11
SIK3-202ENST00000413553 RAB19A4D1S5 217 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 RNF222A6NCQ9 220 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 TVP23AA6NH52 213 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 TMEM200CA6NKL6 621 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 OR6C76A6NM76 312 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 MBTPS2O43462 519 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 SGCEO43556 437 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 CDC40O60508 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
SIK3-202ENST00000413553 GLCEO94923 617 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 AKR7A3O95154 331 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 WNT11O96014 354 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 CRYBA1P05813 215 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 SLC35G6P0C7Q6 338 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 ZNF806P0C7X5 589 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 PEBP1P30086 187 aaKnown RBP8.09□□□□□ -1.11
SIK3-202ENST00000413553 TAS2R19P59542 299 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 DHRS2Q13268 280 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 SMAD4Q13485 552 aaKnown RBP8.09□□□□□ -1.11
SIK3-202ENST00000413553 SLC35D3Q5M8T2 416 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 TMEM205Q6UW68 189 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 ACOT7LQ6ZUV0 252 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 JAZF1Q86VZ6 243 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 GALNT16Q8N428 558 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 INO80EQ8NBZ0 244 aaPredicted RBP8.09□□□□□ -1.11
SIK3-202ENST00000413553 CLEC1AQ8NC01 280 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 OR1J4Q8NGS1 313 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 ZNF417Q8TAU3 575 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 LMF1Q96S06 567 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 PHF7Q9BWX1 381 aaPredicted RBP8.09□□□□□ -1.11
SIK3-202ENST00000413553 FAM117AQ9C073 453 aa8.09□□□□□ -1.11
SIK3-202ENST00000413553 MRM2Q9UI43 246 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms