RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 C16orf47Q6ZP98 133 aaPredicted RBP15.32■□□□□ 0.04
PTPRC-206ENST00000413409 PLEKHG7Q6ZR37 379 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 ACBD4Q8NC06 268 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 OR2T4Q8NH00 348 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 NEIL3Q8TAT5 605 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 HAVCR2Q8TDQ0 301 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 C8orf44Q96CB5 159 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 MNTQ99583 582 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 SPOCK3Q9BQ16 436 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 ALG12Q9BV10 488 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 SDHAF3Q9NRP4 125 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 ST6GALNAC2Q9UJ37 374 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 SH3BGRL2Q9UJC5 107 aa15.32■□□□□ 0.04
PTPRC-206ENST00000413409 SIRT4Q9Y6E7 314 aaPredicted RBP15.32■□□□□ 0.04
PTPRC-206ENST00000413409 MPDZO75970 2070 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 hCG_2014768A0A024R1R8 64 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 J3QLW9 94 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 CTDSP2O14595 271 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 CASKO14936 926 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 OGG1O15527 345 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 ZNF208O43345 1280 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 TRIM3O75382 744 aaPredicted RBP15.31■□□□□ 0.04
PTPRC-206ENST00000413409 CD63P08962 238 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 CLEC2LP0C7M8 214 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 ZNF19P17023 458 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 PRKCAP17252 672 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 TNFSF8P32971 234 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 NAA10P41227 235 aaPredicted RBP15.31■□□□□ 0.04
PTPRC-206ENST00000413409 APOBEC1P41238 236 aaKnown RBP15.31■□□□□ 0.04
PTPRC-206ENST00000413409 FOLR3P41439 243 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 GBX2P52951 348 aaPredicted RBP15.31■□□□□ 0.04
PTPRC-206ENST00000413409 MXD1Q05195 221 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 AIMP2Q13155 320 aaKnown RBP15.31■□□□□ 0.04
PTPRC-206ENST00000413409 CCDC58Q4VC31 144 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 AGAP7PQ5VUJ5 663 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 TMEM81Q6P7N7 255 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 ARL9Q6T311 187 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 SSX6Q7RTT6 188 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 SLC16A9Q7RTY1 509 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 LYSMD2Q8IV50 215 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 MS4A15Q8N5U1 240 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 OR2Y1Q8NGV0 311 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 RPS4Y2Q8TD47 263 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 ASB15Q8WXK1 588 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 PGLYRP3Q96LB9 341 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 AGAP4Q96P64 663 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 DCLRE1CQ96SD1 692 aaKnown RBP15.31■□□□□ 0.04
PTPRC-206ENST00000413409 MDFIQ99750 246 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 DEFB126Q9BYW3 111 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 INIPQ9NRY2 104 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 QPCTLQ9NXS2 382 aa15.31■□□□□ 0.04
PTPRC-206ENST00000413409 MRPL39Q9NYK5 338 aaKnown RBP15.31■□□□□ 0.04
PTPRC-206ENST00000413409 FLNAP21333 2647 aaKnown RBP15.31■□□□□ 0.04
PTPRC-206ENST00000413409 IGHV1-45A0A0A0MS14 117 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 FAM221AA4D161 298 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 CD8B2A6NJW9 211 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 FTCDNL1E5RQL4 147 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 GMFGO60234 142 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 SELENOFO60613 162 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 SC5DO75845 299 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 SERPINA3P01011 423 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 CD8BP10966 210 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 OR12D2P58182 307 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 MRPL28Q13084 256 aaKnown RBP15.3■□□□□ 0.04
PTPRC-206ENST00000413409 CDK5R1Q15078 307 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 DDI2Q5TDH0 399 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 MTFR2Q6P444 385 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 PAMR1Q6UXH9 720 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 TGIF2LYQ8IUE0 185 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 SCAIQ8N9R8 606 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 OR6K6Q8NGW6 343 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 ZNF519Q8TB69 540 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 M1APQ8TC57 530 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 THAP3Q8WTV1 239 aaPredicted RBP15.3■□□□□ 0.04
PTPRC-206ENST00000413409 SMIM19Q96E16 107 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 SPACA9Q96E40 222 aaPredicted RBP15.3■□□□□ 0.04
PTPRC-206ENST00000413409 HDHD5Q9BXW7 423 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 RPRD1BQ9NQG5 326 aaKnown RBP15.3■□□□□ 0.04
PTPRC-206ENST00000413409 TAS2R5Q9NYW4 299 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 KLRF1Q9NZS2 232 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 PPP4R1LQ9P1A2 415 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 WIF1Q9Y5W5 379 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 ABCA4P78363 2273 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 CPAMD8Q8IZJ3 1885 aa15.3■□□□□ 0.04
PTPRC-206ENST00000413409 NSD1Q96L73 2696 aaPredicted RBP15.29■□□□□ 0.04
PTPRC-206ENST00000413409 NPIPB13A6NJU9 1138 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 NPIPB4C9JG80 1138 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 E9PI62 339 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 PFDN1O60925 122 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 WISP2O76076 250 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 F13BP05160 661 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 COX6A1P12074 109 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 GRPRP30550 384 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 PTGDSP41222 190 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 TGM4P49221 684 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 CENPAP49450 140 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 RPL27P61353 136 aaKnown RBP15.29■□□□□ 0.04
PTPRC-206ENST00000413409 PPP3R1P63098 170 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 EEF1A1P5Q5VTE0 462 aa15.29■□□□□ 0.04
PTPRC-206ENST00000413409 RPL22L1Q6P5R6 122 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms