RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 TRIM36Q9NQ86 728 aa10.36□□□□□ -0.75
SNRNP35-202ENST00000412157 PAQR5Q9NXK6 330 aaPredicted RBP10.36□□□□□ -0.75
SNRNP35-202ENST00000412157 TMEM14AQ9Y6G1 99 aa10.36□□□□□ -0.75
SNRNP35-202ENST00000412157 IGLV1-36A0A0B4J1U3 117 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 A0A1W2PQL4 384 aaPredicted RBP10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 H0YC42 278 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 J3QLW9 94 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 SLC22A1O15245 554 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 AIREO43918 545 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 PGA4P0DJD7 388 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 PGA3P0DJD8 388 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 CTLA4P16410 223 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 CPEP16870 476 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 ZNF708P17019 499 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 ZNF19P17023 458 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 KLK2P20151 261 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 NR4A1P22736 598 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 GADD45AP24522 165 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 CD79BP40259 229 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 EIF2S3P41091 472 aaKnown RBP10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 CSNK1A1P48729 337 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 UCNP55089 124 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 CLDN15P56746 228 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 CLDN18P56856 261 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 PMP22Q01453 160 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 BDH1Q02338 343 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 SRYQ05066 204 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 FMODQ06828 376 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 ACSM1Q08AH1 577 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 SLC17A1Q14916 467 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 ZNF169Q14929 603 aaPredicted RBP10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 THEM4Q5T1C6 240 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 CARD17Q5XLA6 110 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 VASNQ6EMK4 673 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 ABLIM2Q6H8Q1 611 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 LYPD4Q6UWN0 246 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 IGFL3Q6UXB1 125 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 SLC16A12Q6ZSM3 486 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 CREB3L2Q70SY1 520 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 FAM220AQ7Z4H9 259 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 KLBQ86Z14 1044 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 TIGD4Q8IY51 512 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 ALDH16A1Q8IZ83 802 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 SYS1Q8N2H4 156 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 OR10H5Q8NGA6 315 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 C4orf36Q96KX1 117 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 ZNF649Q9BS31 505 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 TTTY10Q9BZA0 68 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 ZDHHC11Q9H8X9 412 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 WDR76Q9H967 626 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 MARCH7Q9H992 704 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 LAMP5Q9UJQ1 280 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 MCTS1Q9ULC4 181 aaKnown RBP10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 COA3Q9Y2R0 106 aaPredicted RBP10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 SETXQ7Z333 2677 aaKnown RBP10.35□□□□□ -0.75
SNRNP35-202ENST00000412157 DNAJC13O75165 2243 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 ZNF407Q9C0G0 2248 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 ATXN7O15265 892 aaPredicted RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 CYTIPO60759 359 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 C1QL1O75973 258 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 ITGB2P05107 769 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 ZNF823P16415 610 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 PSMA1P25786 263 aaKnown RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 ENTPD1P49961 510 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 GBX2P52951 348 aaPredicted RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 HCCSP53701 268 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 TMPRSS3P57727 454 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 LSM3P62310 102 aaKnown RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 ADAM8P78325 824 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 RASGEF1BQ0VAM2 473 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 TPBGQ13641 420 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 SSX1Q16384 188 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 CDONQ4KMG0 1287 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 LIPKQ5VXJ0 399 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 NHLRC1Q6VVB1 395 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 PLEKHG7Q6ZR37 379 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 FCRLAQ7L513 359 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 VASH1Q7L8A9 365 aaPredicted RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 SSX6Q7RTT6 188 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 CDC20BQ86Y33 519 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 PHC2Q8IXK0 858 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 ZNF485Q8NCK3 441 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 OR6N1Q8NGY5 312 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 SMAP2Q8WU79 429 aaPredicted RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 ROBO4Q8WZ75 1007 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 INTS12Q96CB8 462 aaKnown RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 TSC22D3Q99576 134 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 MRPL13Q9BYD1 178 aaKnown RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 PRRG4Q9BZD6 226 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 ISG20L2Q9H9L3 353 aaKnown RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 EXOSC4Q9NPD3 245 aaKnown RBP10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 NDUFB11Q9NX14 153 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 BABAM2Q9NXR7 383 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 STUB1Q9UNE7 303 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 COPS3Q9UNS2 423 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 RCE1Q9Y256 329 aa10.34□□□□□ -0.75
SNRNP35-202ENST00000412157 LIPGQ9Y5X9 500 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms