RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 CSTAP01040 98 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PMP2P02689 132 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ADRB1P08588 477 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CTXN1P60606 82 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 RPL7AP62424 266 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 UBAP2LQ14157 1087 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 GANABQ14697 944 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM95Q3KNT9 176 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 CMPK2Q5EBM0 449 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM65Q6PI78 240 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 GDPGP1Q6ZNW5 385 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 TFAP2DQ7Z6R9 452 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR4X2Q8NGF9 303 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR4A5Q8NH83 315 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 RAB40AQ8WXH6 277 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 RND1Q92730 232 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FAXDC2Q96IV6 333 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 NELL2Q99435 816 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OSMRQ99650 979 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR6C2Q9NZP2 312 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MARCH2Q9P0N8 246 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 PISDQ9UG56 409 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR5V1Q9UGF6 321 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ANKRD50Q9ULJ7 1429 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SPATA31A1Q5TZJ5 1347 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 TRAV39A0A0B4J263 110 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 MEX3AA1L020 520 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM200CA6NKL6 621 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 VWC2LB2RUY7 222 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 APOC4-APOC2K7ER74 178 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 NUDT21O43809 227 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 APOC2P02655 101 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 GABRB1P18505 474 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 HRH2P25021 359 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 FLT3LGP49771 235 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 TBPL1P62380 186 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 EBPQ15125 230 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM241Q24JQ0 296 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF385BQ569K4 471 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 DPPA3Q6W0C5 159 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 SLC39A7Q92504 469 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 C19orf43Q9BQ61 176 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 DEFB126Q9BYW3 111 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 NAA50Q9GZZ1 169 aaKnown RBP4.26□□□□□ -1.73
PTPN13-202ENST00000411767 RBKSQ9H477 322 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 RHBDD3Q9Y3P4 386 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 ADGRF5Q8IZF2 1346 aa4.26□□□□□ -1.73
PTPN13-202ENST00000411767 OR6C76A6NM76 312 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 B4DGG1 531 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 FOXE1O00358 373 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-202ENST00000411767 ALX3O95076 343 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 CFIP05156 583 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 EBLN1P0CF75 366 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 TEAD1P28347 426 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 RTP1P59025 263 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 GNB2P62879 340 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 EDDM3AQ14507 147 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 OR1C1Q15619 314 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 DHRS4L2Q6PKH6 230 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 Q71RC1 249 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-202ENST00000411767 DRAXINQ8NBI3 349 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-202ENST00000411767 OR10X1Q8NGY0 326 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 ARRDC2Q8TBH0 407 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 HHIPL1Q96JK4 782 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 FAM234AQ9H0X4 552 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 SLC25A32Q9H2D1 315 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 EBF2Q9HAK2 575 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 CSNK1G3Q9Y6M4 447 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 KDM6AO15550 1401 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-202ENST00000411767 SOCS7O14512 581 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 SCAMP2O15127 329 aaKnown RBP4.25□□□□□ -1.73
PTPN13-202ENST00000411767 B4GALT5O43286 388 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 MPIG6BO95866 241 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 CD79AP11912 226 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 NQO2P16083 231 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 ENGP17813 658 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 BLVRBP30043 206 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-202ENST00000411767 RPS14P62263 151 aaKnown RBP4.25□□□□□ -1.73
PTPN13-202ENST00000411767 CNTN2Q02246 1040 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 LTBQ06643 244 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 CXCL9Q07325 125 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 FAM214AQ32MH5 1076 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 NUP43Q8NFH3 380 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 OR4K2Q8NGD2 314 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 OR6K3Q8NGY3 331 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 RTP4Q96DX8 246 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 PERPQ96FX8 193 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 TAAR6Q96RI8 345 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 PEBP4Q96S96 227 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 GPR20Q99678 358 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 MS4A7Q9GZW8 240 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-202ENST00000411767 TAF9BQ9HBM6 251 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 NPVFQ9HCQ7 196 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 NECAP2Q9NVZ3 263 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 TRBC2A0A5B9 178 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 MFSD2BA6NFX1 497 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 TIMM8AO60220 97 aaPredicted RBP4.25□□□□□ -1.73
PTPN13-202ENST00000411767 OR2T7P0C7T2 308 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 ICAM2P13598 275 aa4.25□□□□□ -1.73
PTPN13-202ENST00000411767 DUSP1P28562 367 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms