RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 MFN2O95140 757 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PGA4P0DJD7 388 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PGA3P0DJD8 388 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 GATA3P23771 443 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 STX1BP61266 288 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 UBA52P62987 128 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF74Q16587 644 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PAGE3Q5JUK9 113 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF613Q6PF04 617 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 BLOC1S3Q6QNY0 202 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CROCCP2Q86T23 111 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 RETREG3Q86VR2 466 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TREML1Q86YW5 311 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 FUNDC1Q8IVP5 155 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 LRRC17Q8N6Y2 441 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SMYD1Q8NB12 490 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 RBM15BQ8NDT2 890 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 OR1J1Q8NGS3 322 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CCL17Q92583 94 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ELMOD3Q96FG2 381 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 GAL3ST1Q99999 423 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF747Q9BV97 191 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PARD6BQ9BYG5 372 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 IKZF5Q9H5V7 419 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 NANSQ9NR45 359 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 OPN4Q9UHM6 478 aa12.11□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MGAM2Q2M2H8 2515 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MEGF8Q7Z7M0 2845 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CPSF4LA6NMK7 179 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 EVPLLA8MZ36 301 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 M0R3H8 397 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TMPRSS2O15393 492 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CHP2O43745 196 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 FMO6PO60774 539 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 HIST1H2ABP04908 130 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 GPX2P18283 190 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MAKP20794 623 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CCNOP22674 350 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 APLNRP35414 380 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF81P51508 661 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF84P51523 738 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CLRN1P58418 232 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 LCN2P80188 198 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 FOXL1Q12952 345 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ENTPD8Q5MY95 495 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PRR31Q5SQ13 230 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TTC33Q6PID6 262 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 EPGNQ6UW88 154 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 HIST3H2AQ7L7L0 130 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 LRRC18Q8N456 261 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 HIPK4Q8NE63 616 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 HIST1H2ACQ93077 130 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MCHR2Q969V1 340 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SPDL1Q96EA4 605 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ARHGDIGQ99819 225 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 NTN4Q9HB63 628 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CCDC167Q9P0B6 97 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CORO2BQ9UQ03 480 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 GMEB1Q9Y692 573 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 USH1CQ9Y6N9 552 aa12.1□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TRBV5-3A0A0A0MS03 114 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ISPDA4D126 451 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 KPNA4O00629 521 aaPredicted RBP12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SPRY3O43610 288 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 FSHBP01225 129 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 IGHV1-46P01743 117 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 IGHG1P01857 330 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 THY1P04216 161 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 HKR1P10072 659 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 UMPSP11172 480 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 GCH1P30793 250 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MRPL19P49406 292 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 HSF2Q03933 536 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 DUSP7Q16829 419 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 NRN1LQ496H8 165 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PABPC1L2AQ5JQF8 200 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SHISA2Q6UWI4 295 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 RBMS3Q6XE24 437 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SIGLECL1Q8N7X8 197 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CPEB3Q8NE35 698 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 OR6T1Q8NGN1 323 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 DVL3Q92997 716 aaPredicted RBP12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF347Q96SE7 839 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 KCNN2Q9H2S1 579 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF696Q9H7X3 374 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SLCO1B3Q9NPD5 702 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 NKIRAS1Q9NYS0 192 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 UBAP1Q9NZ09 502 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF229Q9UJW7 825 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TRIM33Q9UPN9 1127 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ANGPT4Q9Y264 503 aa12.09□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PLSCR5A0PG75 271 aa12.08□□□□□ -0.48
HLA-DQB2-229ENST00000411527 BLOC1S5-TXNDC5H3BN57 136 aa12.08□□□□□ -0.48
HLA-DQB2-229ENST00000411527 POLR3GO15318 223 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB2-229ENST00000411527 LYPD3O95274 346 aa12.08□□□□□ -0.48
HLA-DQB2-229ENST00000411527 OPN1SWP03999 348 aa12.08□□□□□ -0.48
HLA-DQB2-229ENST00000411527 MMP7P09237 267 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB2-229ENST00000411527 ASAH2BP0C7U1 165 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms