RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 TMEM123Q8N131 208 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 TMEM105Q8N8V8 129 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 ZNF557Q8N988 423 aaPredicted RBP0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 ST20-AS1Q8NBB2 130 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 C1orf64Q8NEQ6 169 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 NOXO1Q8NFA2 376 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 OR4K5Q8NGD3 323 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 OR5M1Q8NGP8 315 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 OR13G1Q8NGZ3 307 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 CREB3L1Q96BA8 519 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 CXorf40BQ96DE9 158 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 TGM7Q96PF1 710 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 GPA33Q99795 319 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 RARRES2Q99969 163 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 LZTS2Q9BRK4 669 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 FAIM2Q9BWQ8 316 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 LRRN3Q9H3W5 708 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 DHX35Q9H5Z1 703 aaKnown RBP0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 PALMDQ9NP74 551 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 DDX19AQ9NUU7 478 aaKnown RBP0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 TMOD2Q9NZR1 351 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 CHRNA9Q9UGM1 479 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 RPH3ALQ9UNE2 315 aa0.68□□□□□ -2.3
RNU2-54P-201ENST00000410299 AHDC1Q5TGY3 1603 aaPredicted RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 COL11A1P12107 1806 aaPredicted RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 IGHV3OR16-8A0A075B7F1 116 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 ZNF98A6NK75 572 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 ZNF716A6NP11 495 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 A8MUI8 341 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 J3QKU1 62 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 J3QRE1 110 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 BPY2O14599 106 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 PRRG1O14668 218 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 MRPS12O15235 138 aaKnown RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 MAPK13O15264 365 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 PRKAB2O43741 272 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 RAMP3O60896 148 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 MFN2O95140 757 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 UTS2O95399 124 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 AK1P00568 194 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 CD74P04233 296 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 ZNF735P0CB33 412 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 UBTFL6P0CB48 400 aaPredicted RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 IL10P22301 178 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 DCKP27707 260 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 HRH1P35367 487 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 ATP6V1E1P36543 226 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 CEACAM6P40199 344 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 TNFSF9P41273 254 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 CDKN1BP46527 198 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 RORCP51449 518 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 RBX1P62877 108 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 PRKCDQ05655 676 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 MESDQ14696 234 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 GANABQ14697 944 aaKnown RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 PON2Q15165 354 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 TATDN3Q17R31 274 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 HCP5Q6MZN7 132 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 SPINT4Q6UDR6 99 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 HDDC2Q7Z4H3 204 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 NUDCD3Q8IVD9 361 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 CEP112Q8N8E3 955 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 OR9A2Q8NGT5 310 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 LILRB4Q8NHJ6 448 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 C17orf50Q8WW18 174 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 SLC25A46Q96AG3 418 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 FLYWCH2Q96CP2 140 aaKnown RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 KLF6Q99612 283 aaPredicted RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 SAV1Q9H4B6 383 aaPredicted RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 RPF2Q9H7B2 306 aaKnown RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 CGNQ9P2M7 1197 aaKnown RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 CTSFQ9UBX1 484 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 HOOK1Q9UJC3 728 aaKnown RBP0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 IKBKGQ9Y6K9 419 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 U3KQV3 271 aa0.67□□□□□ -2.3
RNU2-54P-201ENST00000410299 TRAV39A0A0B4J263 110 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 A0A0B4J2A0 478 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 POLR1CO15160 346 aaPredicted RBP0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 CLDN3O15551 220 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 BAG2O95816 211 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 IGLV6-57P01721 117 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 CT62P0C5K7 136 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 STMN1P16949 149 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 CCR1P32246 355 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 OPRD1P41143 372 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 AQP2P41181 271 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 RGS4P49798 205 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 OGDHQ02218 1023 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 ZSCAN26Q16670 478 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 AP1ARQ63HQ0 302 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 ARL9Q6T311 187 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 PLET1Q6UQ28 207 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 PRSS58Q8IYP2 241 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 TRMT10AQ8TBZ6 339 aaKnown RBP0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 FAM110BQ8TC76 370 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 PHOSPHO2Q8TCD6 241 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 LKAAEAR1Q8TD35 194 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 TMEM54Q969K7 222 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 FAM3DQ96BQ1 224 aa0.66□□□□□ -2.3
RNU2-54P-201ENST00000410299 TTC25Q96NG3 672 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms