RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SLC7A13Q8TCU3 470 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 ISG20Q96AZ6 181 aaKnown RBP10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 FGGYQ96C11 551 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 SLC35A4Q96G79 324 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 PECRQ9BY49 303 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 POFUT1Q9H488 388 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 NECAP2Q9NVZ3 263 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 SLC23A1Q9UHI7 598 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 TMED7Q9Y3B3 224 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 TLCD2A6NGC4 264 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 EIF1BO60739 113 aaKnown RBP10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 CPEP16870 476 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 RAB5CP51148 216 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 ZNF71Q9NQZ8 489 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 TYROBPO43914 113 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 M6PRP20645 277 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 PSMB3P49720 205 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 EGFL6Q8IUX8 553 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 OR11A1Q9GZK7 315 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 CHST6Q9GZX3 395 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 OR52D1Q9H346 318 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 ARL2-SNX15V9GYD0 113 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 DOCK1Q14185 1865 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 RPS10-NUDT3A0A1W2PQS6 291 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 SPRY3O43610 288 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 SPP1P10451 314 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 RPS10P46783 165 aaKnown RBP10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 HTR6P50406 440 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 NOVA1P51513 510 aaKnown RBP10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 PAGE3Q5JUK9 113 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 METAP1DQ6UB28 335 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 C6orf89Q6UWU4 347 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 CPEB2Q7Z5Q1 589 aaKnown RBP10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 LILRA2Q8N149 483 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 MFSD9Q8NBP5 474 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 RTL8AQ9BWD3 113 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 ACPTQ9BZG2 426 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 THADAQ6YHU6 1953 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 SIRPB1O00241 398 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 DHRS4L1P0CG22 281 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 S100A4P26447 101 aaKnown RBP10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 RAP2BP61225 183 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 RIPPLY1Q0D2K3 151 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 PHYHD1Q5SRE7 291 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 FRMPD2BQ6IN97 320 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 PARM1Q6UWI2 310 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 OR2T35Q8NGX2 323 aa10.36□□□□□ -0.75
PRPF40A-202ENST00000410080 PMS2P1A4D2B8 440 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 NFYAP23511 347 aaPredicted RBP10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 EIF1P41567 113 aaKnown RBP10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 CDC34P49427 236 aaPredicted RBP10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 CCBE1Q6UXH8 406 aaPredicted RBP10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 FBXO17Q96EF6 278 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 LHPPQ9H008 270 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 OR8G3PP0DMU2 310 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 RACK1P63244 317 aaKnown RBP10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 FAM69AQ5T7M9 428 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 PRAMEF5Q5TYX0 476 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 PRAMEF6Q5VXH4 476 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 SSX7Q7RTT5 188 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 NLRP8Q86W28 1048 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 CMTM4Q8IZR5 234 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 CD200R1Q8TD46 325 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 BRIX1Q8TDN6 353 aaKnown RBP10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 KCNE4Q8WWG9 221 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 ADAM12O43184 909 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 SYT9Q86SS6 491 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 KDM8Q8N371 416 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 OR56B1Q8NGI3 324 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 ZNF420Q8TAQ5 688 aaPredicted RBP10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 FUNDC2Q9BWH2 189 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 TIMM9Q9Y5J7 89 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 SLC22A23A1A5C7 686 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 CDHR4A6H8M9 788 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 TMEM221A6NGB7 291 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 SULT1C2O00338 296 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 TOX4O94842 621 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 HLA-HP01893 362 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 SEMG1P04279 462 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 ZNF252P-AS1Q0IIN9 211 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 GTDC1Q4AE62 458 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 WDR5BQ86VZ2 330 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 SLC35F3Q8IY50 421 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 FAM58AQ8N1B3 248 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 OR51H1Q8NH63 302 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 OR2T6Q8NHC8 308 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 C1SP09871 688 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 CCR7P32248 378 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 PRLHRP49683 370 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 CLDN12P56749 244 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 ADIRFQ15847 76 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 TUSC1Q2TAM9 212 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 C17orf107Q6ZR85 190 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 USP51Q70EK9 711 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 PIWIL3Q7Z3Z3 882 aaKnown RBP10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 NECAP1Q8NC96 275 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 MOB3AQ96BX8 217 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 KIF13BQ9NQT8 1826 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 SHHQ15465 462 aa10.35□□□□□ -0.75
PRPF40A-202ENST00000410080 TVP23CQ96ET8 276 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms