RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 HOXB6P17509 224 aaKnown RBP3.9□□□□□ -1.79
LSM5-205ENST00000409952 IGHV1-2P23083 117 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 CCR8P51685 355 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 BLVRAP53004 296 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 UGT2B15P54855 530 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 RPL32P62910 135 aaKnown RBP3.9□□□□□ -1.79
LSM5-205ENST00000409952 SP4Q02446 784 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 DGCR6Q14129 220 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 GGTLC2Q14390 218 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 ATP6V1FQ16864 119 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 C5orf64Q2M2E5 130 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 KLF17Q5JT82 389 aaPredicted RBP3.9□□□□□ -1.79
LSM5-205ENST00000409952 TIGD3Q6B0B8 471 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 APOBEC3HQ6NTF7 200 aaKnown RBP3.9□□□□□ -1.79
LSM5-205ENST00000409952 Q6ZN92 141 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 TPGS1Q6ZTW0 290 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 ZNF546Q86UE3 836 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 RDH10Q8IZV5 341 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 KIF2BQ8N4N8 673 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 OR2AP1Q8NGE2 309 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 SPATA3Q8NHX4 192 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 CENPNQ96H22 339 aaPredicted RBP3.9□□□□□ -1.79
LSM5-205ENST00000409952 PGLYRP4Q96LB8 373 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 CTRCQ99895 268 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 RARRES2Q99969 163 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 UTP23Q9BRU9 249 aaKnown RBP3.9□□□□□ -1.79
LSM5-205ENST00000409952 ELOVL4Q9GZR5 314 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 TUBB1Q9H4B7 451 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 CTPS2Q9NRF8 586 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 SDHAF3Q9NRP4 125 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 KCNIP1Q9NZI2 227 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 SENP1Q9P0U3 644 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 OR1A1Q9P1Q5 309 aa3.9□□□□□ -1.79
LSM5-205ENST00000409952 ANKRD30BQ9BXX2 1392 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 IGKV2D-30A0A075B6S6 120 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 IGHV3-16A0A0C4DH30 117 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 PSMB11A5LHX3 300 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 FAM72CH0Y354 149 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 MKRN2OSH3BPM6 223 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 TNFSF11O14788 317 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 EIF3GO75821 320 aaKnown RBP eCLIP3.89□□□□□ -1.79
LSM5-205ENST00000409952 BRI3O95415 125 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 TDP2O95551 362 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 RENP00797 406 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 RHOCP08134 193 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 CT45A6P0DMU7 189 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 CT45A5P0DMU8 189 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 CT45A7P0DMV0 189 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 ZNF250P15622 560 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 ZNF26P17031 533 aaPredicted RBP3.89□□□□□ -1.79
LSM5-205ENST00000409952 PGAM1P18669 254 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 SYT1P21579 422 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 UGT2B10P36537 528 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 UBE2G2P60604 165 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 ERVFC1-1P60608 527 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 GNB1P62873 340 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 CALCOCO2Q13137 446 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 C5orf47Q569G3 176 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 CT45A1Q5HYN5 189 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 FAM72AQ5TYM5 149 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 OLFML2AQ68BL7 652 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 ZNF324BQ6AW86 544 aaPredicted RBP3.89□□□□□ -1.79
LSM5-205ENST00000409952 OR5M10Q6IEU7 315 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 FAM72DQ6L9T8 149 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 C1orf94Q6P1W5 598 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 TFAP2EQ6VUC0 442 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 TMEM135Q86UB9 458 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 PPP1R27Q86WC6 154 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 FAM72BQ86X60 149 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 SKA3Q8IX90 412 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 SPAG16Q8N0X2 631 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 SLC22A18ASQ8N1D0 253 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 OR2A12Q8NGT7 310 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 CT45A3Q8NHU0 189 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 OR8D1Q8WZ84 308 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 ITCHQ96J02 903 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 SERPINB11Q96P15 392 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 SERPINB12Q96P63 405 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 ATF6BQ99941 703 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 CCDC28BQ9BUN5 200 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 RNF126Q9BV68 326 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 RNF167Q9H6Y7 350 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 EXD2Q9NVH0 621 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 IL20Q9NYY1 176 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 ASIC3Q9UHC3 531 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 GNPTGQ9UJJ9 305 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 SCML1Q9UN30 329 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 FADS3Q9Y5Q0 445 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 TSSC4Q9Y5U2 329 aaPredicted RBP3.89□□□□□ -1.79
LSM5-205ENST00000409952 URGCP-MRPS24S4R325 110 aa3.89□□□□□ -1.79
LSM5-205ENST00000409952 TRIP12Q14669 1992 aaPredicted RBP3.89□□□□□ -1.79
LSM5-205ENST00000409952 LRPPRCP42704 1394 aaKnown RBP3.89□□□□□ -1.79
LSM5-205ENST00000409952 RPL37AP8A6NKH3 93 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 DHRS7CA6NNS2 312 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 EFCAB7A8K855 629 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 E7ENQ6 273 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 F8VP50 259 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 BMPR1BO00238 502 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 ACOT8O14734 319 aa3.88□□□□□ -1.79
LSM5-205ENST00000409952 B4GALT5O43286 388 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms