RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 FLVCR1-AS1Q8TAF5 88 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 CREB3L1Q96BA8 519 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 MICU1Q9BPX6 476 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 ZNF696Q9H7X3 374 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 SLC52A3Q9NQ40 469 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 OR14J1Q9UGF5 321 aa10.28□□□□□ -0.76
SNX13-202ENST00000409604 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 ISPDA4D126 451 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 SNPHO15079 494 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 LIPAP38571 399 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 ADARB1P78563 741 aaKnown RBP10.27□□□□□ -0.76
SNX13-202ENST00000409604 INSL4Q14641 139 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 LTC4SQ16873 150 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 COMTD1Q86VU5 262 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 CARFQ8N187 725 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 FKBP10Q96AY3 582 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 SARAFQ96BY9 339 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 GIMAP5Q96F15 307 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 UBL7Q96S82 380 aaPredicted RBP10.27□□□□□ -0.76
SNX13-202ENST00000409604 ISG20L2Q9H9L3 353 aaKnown RBP10.27□□□□□ -0.76
SNX13-202ENST00000409604 SLC7A11Q9UPY5 501 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 EYSQ5T1H1 3165 aa10.27□□□□□ -0.76
SNX13-202ENST00000409604 CCDC182A6NF36 153 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 VSTM5A8MXK1 200 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 HLA-HP01893 362 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 SBK2P0C263 348 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 SMIM10L1P0DMW3 83 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 DSCR4P56555 118 aaPredicted RBP10.27□□□□□ -0.77
SNX13-202ENST00000409604 ZNF846Q147U1 533 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 FOXRED2Q8IWF2 684 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 SULF2Q8IWU5 870 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 PLPP7Q8NBV4 271 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 ST8SIA1Q92185 356 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 SMIM10Q96HG1 83 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 MRGPRX4Q96LA9 322 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 MED18Q9BUE0 208 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 CHIAQ9BZP6 476 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 MEPEQ9NQ76 525 aaPredicted RBP10.27□□□□□ -0.77
SNX13-202ENST00000409604 ZNF226Q9NYT6 803 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 PSORS1C1Q9UIG5 152 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 SERTM1A2A2V5 107 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 PDCD5O14737 125 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 AWAT2Q6E213 333 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 OR2V1Q8NHB1 315 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 FAM122AQ96E09 287 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 PDCD10Q9BUL8 212 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 COQ3Q9NZJ6 369 aa10.27□□□□□ -0.77
SNX13-202ENST00000409604 RAB3BP20337 219 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 ACP1P24666 158 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 GCH1P30793 250 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 MRPL19P49406 292 aaKnown RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 TPTEP56180 551 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 MFAP5Q13361 173 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 ZNF829Q3KNS6 432 aaPredicted RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 NXNL2Q5VZ03 156 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 WDR88Q6ZMY6 472 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 ZNF704Q6ZNC4 412 aaPredicted RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 ARMC10Q8N2F6 343 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 ZNF442Q9H7R0 627 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 ZNF223Q9UK11 482 aaPredicted RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 SIGLEC7Q9Y286 467 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 PEX16Q9Y5Y5 336 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 C5orf49A4QMS7 147 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 OR6C68A6NDL8 312 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 ANKUB1A6NFN9 424 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 GPR171O14626 319 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 TBX19O60806 448 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 CRTAPO75718 401 aaPredicted RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 PAHP00439 452 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 LIPCP11150 499 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 PTGS2P35354 604 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 TAS2R43P59537 309 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 POU4F2Q12837 409 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 IL10RAQ13651 578 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 MOB3CQ70IA8 216 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 ZNF227Q86WZ6 799 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 ZBTB8BQ8NAP8 495 aaPredicted RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 DEFB108BQ8NET1 73 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 GPR148Q8TDV2 347 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 SLC25A43Q8WUT9 341 aaPredicted RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 DCLRE1CQ96SD1 692 aaKnown RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 ARHGDIGQ99819 225 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 HCAR1Q9BXC0 346 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 KLK13Q9UKR3 277 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 RAXQ9Y2V3 346 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 SONP18583 2426 aaKnown RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 MED13Q9UHV7 2174 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 TRAV6A0A075B6T7 132 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 TRAV18A0A075B6X5 111 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 C21orf140B9A014 251 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 HPP00738 406 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 GABRR1P24046 479 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 SDHAP31040 664 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 TEKQ02763 1124 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 SPIN3Q5JUX0 258 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 GLT8D1Q68CQ7 371 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 COX15Q7KZN9 410 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 PPP1R32Q7Z5V6 425 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 OR6V1Q8N148 313 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 FGGYQ96C11 551 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms