RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 HLA-DPB1P04440 258 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 GNAO1P09471 354 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 SERPINB5P36952 375 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 CDKN2BP42772 138 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 CDH4P55283 916 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 IRX3P78415 501 aaPredicted RBP2.01□□□□□ -2.09
PMS1-203ENST00000409593 LOXL1Q08397 574 aaPredicted RBP2.01□□□□□ -2.09
PMS1-203ENST00000409593 TCP10Q12799 353 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 SLC25A24Q6NUK1 477 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 KDM7AQ6ZMT4 941 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 OSR2Q8N2R0 312 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 OR2T3Q8NH03 318 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 TMEM54Q969K7 222 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 SYAP1Q96A49 352 aaPredicted RBP2.01□□□□□ -2.09
PMS1-203ENST00000409593 SH3GL3Q99963 347 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 TRIM62Q9BVG3 475 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 PSG8Q9UQ74 426 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 MRPS7Q9Y2R9 242 aaKnown RBP2.01□□□□□ -2.09
PMS1-203ENST00000409593 CDHR2Q9BYE9 1310 aa2.01□□□□□ -2.09
PMS1-203ENST00000409593 CCL21O00585 134 aa2□□□□□ -2.09
PMS1-203ENST00000409593 HRH1P35367 487 aa2□□□□□ -2.09
PMS1-203ENST00000409593 MAGEA8P43361 318 aa2□□□□□ -2.09
PMS1-203ENST00000409593 CDKN1BP46527 198 aa2□□□□□ -2.09
PMS1-203ENST00000409593 RFX3P48380 749 aa2□□□□□ -2.09
PMS1-203ENST00000409593 OGDHQ02218 1023 aa2□□□□□ -2.09
PMS1-203ENST00000409593 MAB21L1Q13394 359 aa2□□□□□ -2.09
PMS1-203ENST00000409593 ZSCAN26Q16670 478 aa2□□□□□ -2.09
PMS1-203ENST00000409593 EXOC3L2Q2M3D2 409 aa2□□□□□ -2.09
PMS1-203ENST00000409593 CCDC92Q53HC0 331 aaPredicted RBP2□□□□□ -2.09
PMS1-203ENST00000409593 LHFPL3Q86UP9 236 aa2□□□□□ -2.09
PMS1-203ENST00000409593 ABHD3Q8WU67 409 aa2□□□□□ -2.09
PMS1-203ENST00000409593 SCFD1Q8WVM8 642 aa2□□□□□ -2.09
PMS1-203ENST00000409593 CREB3L1Q96BA8 519 aa2□□□□□ -2.09
PMS1-203ENST00000409593 COQ2Q96H96 371 aa2□□□□□ -2.09
PMS1-203ENST00000409593 P2RX4Q99571 388 aa2□□□□□ -2.09
PMS1-203ENST00000409593 SLC25A2Q9BXI2 301 aa2□□□□□ -2.09
PMS1-203ENST00000409593 TMEM59Q9BXS4 323 aa2□□□□□ -2.09
PMS1-203ENST00000409593 SYNDIG1Q9H7V2 258 aa2□□□□□ -2.09
PMS1-203ENST00000409593 EPS15L1Q9UBC2 864 aa2□□□□□ -2.09
PMS1-203ENST00000409593 SH3BGRL2Q9UJC5 107 aa2□□□□□ -2.09
PMS1-203ENST00000409593 GPATCH8Q9UKJ3 1502 aaKnown RBP2□□□□□ -2.09
PMS1-203ENST00000409593 MAGEB3O15480 346 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 UTS2O95399 124 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 IL4P05112 153 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 C2P06681 752 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 CD1CP29017 333 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 SMUG1Q53HV7 270 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 PRMT9Q6P2P2 845 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 DNAJC24Q6P3W2 148 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 CEMP1Q6PRD7 247 aaPredicted RBP1.99□□□□□ -2.09
PMS1-203ENST00000409593 LINC00304Q8N9R0 145 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 FAM83FQ8NEG4 500 aaPredicted RBP1.99□□□□□ -2.09
PMS1-203ENST00000409593 FMO2Q99518 471 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 DOK1Q99704 481 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 MFFQ9GZY8 342 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 TRAV26-1A0A087WT03 109 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 TRAV39A0A0B4J263 110 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 KIR2DS1A0A191URI9 304 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 ZNF850A8MQ14 1090 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 K7EM74 188 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 CEACAM6P40199 344 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 NUTF2P61970 127 aaKnown RBP1.99□□□□□ -2.09
PMS1-203ENST00000409593 CDC20Q12834 499 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 PIGHQ14442 188 aaPredicted RBP1.99□□□□□ -2.09
PMS1-203ENST00000409593 KIR2DS1Q14954 304 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 RAET1LQ5VY80 246 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 BRD3OSQ6XYD6 125 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 BHLHA15Q7RTS1 189 aaPredicted RBP1.99□□□□□ -2.09
PMS1-203ENST00000409593 HDDC2Q7Z4H3 204 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 KRTAP13-1Q8IUC0 172 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 PRSS58Q8IYP2 241 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 NARS2Q96I59 477 aaKnown RBP1.99□□□□□ -2.09
PMS1-203ENST00000409593 PLEKHA8Q96JA3 519 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 CNN2Q99439 309 aaKnown RBP1.99□□□□□ -2.09
PMS1-203ENST00000409593 RNF5Q99942 180 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 PARP12Q9H0J9 701 aaKnown RBP1.99□□□□□ -2.09
PMS1-203ENST00000409593 NIPAL2Q9H841 368 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 UVRAGQ9P2Y5 699 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 CTSFQ9UBX1 484 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 PIGLQ9Y2B2 252 aa1.99□□□□□ -2.09
PMS1-203ENST00000409593 IGLV1-50A0A075B6I6 118 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 ZNF207O43670 478 aaKnown RBP1.98□□□□□ -2.09
PMS1-203ENST00000409593 GMFGO60234 142 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 RP2O75695 350 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 EIF3GO75821 320 aaKnown RBP eCLIP1.98□□□□□ -2.09
PMS1-203ENST00000409593 RHOBTB1O94844 696 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 CDRT1O95170 752 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 RAB3DO95716 219 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 MAS1LP35410 378 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 SSR1P43307 286 aaKnown RBP1.98□□□□□ -2.09
PMS1-203ENST00000409593 ZNF816Q0VGE8 651 aaPredicted RBP1.98□□□□□ -2.09
PMS1-203ENST00000409593 RGNQ15493 299 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 SNRNP35Q16560 246 aaKnown RBP1.98□□□□□ -2.09
PMS1-203ENST00000409593 CCDC152Q4G0S7 254 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 CFAP157Q5JU67 520 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 ATAD3BQ5T9A4 648 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 LRRC74BQ6ZQY2 392 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 CALHM1Q8IU99 346 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 NECAP1Q8NC96 275 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 LKAAEAR1Q8TD35 194 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms