RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ECHDC2Q86YB7 292 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 ALLCQ8N6M5 410 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 JOSD2Q8TAC2 188 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 MAGEE2Q8TD90 523 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 NUS1Q96E22 293 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 TIMD4Q96H15 378 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 CPB2Q96IY4 423 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 C1orf147Q96MC9 270 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 XPO6Q96QU8 1125 aaKnown RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 FRMD8P1Q9BZ68 369 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 STMN4Q9H169 189 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 CDC42EP4Q9H3Q1 356 aaKnown RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 OR1A1Q9P1Q5 309 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 HMGXB4Q9UGU5 601 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 DCDC2Q9UHG0 476 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 ANGPTL2Q9UKU9 493 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 ERVW-1Q9UQF0 538 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 CAB39Q9Y376 341 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 DOCK1Q14185 1865 aa3.66□□□□□ -1.82
HMGB3P18-201ENST00000406327 PHIPQ8WWQ0 1821 aa3.65□□□□□ -1.82
HMGB3P18-201ENST00000406327 SMIM23A6NLE4 172 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 ANKRD65E5RJM6 399 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 M0QYV0 167 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 DNALI1O14645 258 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 CST8O60676 142 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 TBL1XO60907 577 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 SLC35E2P0CK97 266 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 FOLR2P14207 255 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 KDELR1P24390 212 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 MIPP30301 263 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 CALCRP30988 508 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 UGT1A3P35503 534 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 PCK1P35558 622 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 CRYBB2P43320 205 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 STARP49675 285 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 BST2Q10589 180 aaKnown RBP3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 HADHQ16836 314 aaKnown RBP3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 Q1RN00 199 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 EIPR1Q53HC9 387 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 C6orf89Q6UWU4 347 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 ALKAL1Q6UXT8 129 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 HSDL2Q6YN16 418 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 ARCQ7LC44 396 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 DHDDSQ86SQ9 333 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 TRIM69Q86WT6 500 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 SKA3Q8IX90 412 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 C10orf67Q8IYJ2 551 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 OTUD6BQ8N6M0 293 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 OR2A12Q8NGT7 310 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 OR9A1PQ8NGU1 263 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 KCNG3Q8TAE7 436 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 UBA3Q8TBC4 463 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 RAB3IL1Q8TBN0 382 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 ACTL9Q8TC94 416 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 ARNTL2Q8WYA1 636 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 CHMP6Q96FZ7 201 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 SIGLEC12Q96PQ1 595 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZNF317Q96PQ6 595 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 SELENOSQ9BQE4 189 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 CNPY3Q9BT09 278 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 TRIM62Q9BVG3 475 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 FAM192AQ9GZU8 254 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 REEP4Q9H6H4 257 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 NT5MQ9NPB1 228 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 LGALS13Q9UHV8 139 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 ABCG2Q9UNQ0 655 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 PDE10AQ9Y233 779 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 TMED5Q9Y3A6 229 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 RPL36Q9Y3U8 105 aaKnown RBP3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 PEX16Q9Y5Y5 336 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 NRCAMQ92823 1304 aa3.65□□□□□ -1.83
HMGB3P18-201ENST00000406327 A0A075B6Q4 140 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 IGHV7-81A0A0B4J1V7 117 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 IGHV3-35A0A0C4DH35 117 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 WWP2O00308 870 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 PHF1O43189 567 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 UGT1A9O60656 530 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 CDH16O75309 829 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 TBX6O95947 436 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 SMIM10L2AP0DMW4 78 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 SMIM10L2BP0DMW5 78 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 KCNE1P15382 129 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 ZP3P21754 424 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 VDAC1P21796 283 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 CD1CP29017 333 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 RPL22P35268 128 aaKnown RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 SLC18A1P54219 525 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 PRMT2P55345 433 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 EIF3EP60228 445 aaKnown RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 CXCL6P80162 114 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 IFT88Q13099 833 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 TFDP2Q14188 446 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 PDK2Q15119 407 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 CCDC14Q49A88 953 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 PAN3Q58A45 887 aaKnown RBP3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 XKR4Q5GH76 650 aa3.64□□□□□ -1.83
HMGB3P18-201ENST00000406327 DMRTC1Q5HYR2 192 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms