RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 TACR3P29371 465 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR2B8PP59922 312 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 DUSP8Q13202 625 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 CRMP1Q14194 572 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR1Q1Q15612 314 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 TP53I3Q53FA7 332 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 RIPPLY2Q5TAB7 128 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 MFSD12Q6NUT3 480 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 MOB3CQ70IA8 216 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR13C2Q8NGS9 318 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 RSC1A1Q92681 617 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR2A7Q96R45 310 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 RRAGCQ9HB90 399 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 HCFC1R1Q9NWW0 138 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 SIGLEC7Q9Y286 467 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 WNT6Q9Y6F9 365 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 XIRP2A4UGR9 3374 aa14.77□□□□□ -0.05
COL4A3BP-204ENST00000405807 TBC1D3EA0A087X179 549 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 A8MWP6 167 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 LAG3P18627 525 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 TM4SF4P48230 202 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 CLDN2P57739 230 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 SIRPAP78324 504 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 MRPS10P82664 201 aaKnown RBP14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 DEFB115Q30KQ5 88 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 ARHGAP11BQ3KRB8 267 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 CYB561A3Q8NBI2 242 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR10A7Q8NGE5 316 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR10D4PQ8NGN7 298 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 CD99L2Q8TCZ2 262 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 DUSP19Q8WTR2 217 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 CLUHP3Q96NS8 147 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 CLCC1Q96S66 551 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 CA10Q9NS85 328 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 IL17BQ9UHF5 180 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 ZDHHC8Q9ULC8 765 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 A0A0U1RQV5 110 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 PIAS2O75928 621 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 HCCSP53701 268 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 ACTA2P62736 377 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 ACTG2P63267 376 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 TEAD2Q15562 447 aa14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 ZNF385CQ66K41 422 aaPredicted RBP14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 ERN2Q76MJ5 926 aaKnown RBP14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 RNASE8Q8TDE3 154 aaKnown RBP14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 TMEM184BQ9Y519 407 aaPredicted RBP14.76□□□□□ -0.05
COL4A3BP-204ENST00000405807 SNRPGP15A8MWD9 76 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 MT-ND4LP03901 98 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 IL5P05113 134 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 HOXB5P09067 269 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 HOXA5P20719 270 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 NDUFS1P28331 727 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 TSFMP43897 325 aaKnown RBP14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 CDX1P47902 265 aaPredicted RBP14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 TDGQ13569 410 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 HYAL4Q2M3T9 481 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 TMEM52BQ4KMG9 183 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 RPL22L1Q6P5R6 122 aaKnown RBP14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 ADAMTSL4Q6UY14 1074 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 NUP54Q7Z3B4 507 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 NRROSQ86YC3 692 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 SYS1Q8N2H4 156 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 KREMEN2Q8NCW0 462 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 DERL3Q96Q80 235 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR14A2Q96R54 314 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 FBXL4Q9UKA2 621 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 MED31Q9Y3C7 131 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 TRBV2A0A0J9YWF9 115 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR2M5A3KFT3 312 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 CD1AP06126 327 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 GKN3PP0CG01 181 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 SRMP19623 302 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 HTR2AP28223 471 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 RAB28P51157 221 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 RPS11P62280 158 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 ZNF626Q68DY1 528 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 FAM199XQ6PEV8 388 aaPredicted RBP14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 LILRA6Q6PI73 481 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR51A7Q8NH64 312 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR8D1Q8WZ84 308 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 PELI1Q96FA3 418 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 KLK11Q9UBX7 282 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 HEATR5BQ9P2D3 2071 aa14.75□□□□□ -0.05
COL4A3BP-204ENST00000405807 CCDC85CA6NKD9 419 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 GYPBP06028 91 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR2T7P0C7T2 308 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 LAMP2P13473 410 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 GAS6Q14393 721 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 OLFML2AQ68BL7 652 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR7G2Q8NG99 324 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR2T27Q8NH04 317 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 THEM6Q8WUY1 208 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 S100A16Q96FQ6 103 aaKnown RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 GINS4Q9BRT9 223 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 C6orf106Q9H6K1 298 aaPredicted RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 GDF2Q9UK05 429 aaPredicted RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 VCANP13611 3396 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 TRAV27A0A087WT01 109 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 ANKRD20A5PA0PJZ0 165 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 IMPA2O14732 288 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms