RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 DRC3Q9H069 523 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 PCBD2Q9H0N5 130 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SIRPDQ9H106 197 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 UCK1Q9HA47 277 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 IL1RL2Q9HB29 575 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 EML4Q9HC35 981 aaKnown RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SCN3AQ9NY46 2000 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 CD274Q9NZQ7 290 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 ERVK-18Q9QC07 812 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 IL19Q9UHD0 177 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 IKZF3Q9UKT9 509 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 RAB23Q9ULC3 237 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 RPH3AQ9Y2J0 694 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 KLHDC2Q9Y2U9 406 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC6A5Q9Y345 797 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 EP300Q09472 2414 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 GMNCA6NCL1 334 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CYSRT1A8MQ03 144 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 TCP11X1B4DZS4 312 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 E2F3O00716 465 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CHEK1O14757 476 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 AQP9O43315 295 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 TSPAN2O60636 221 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 SUPT7LO94864 414 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 GUCA1CO95843 209 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 OTCP00480 354 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 RENP00797 406 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 MT-ND1P03886 318 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 RETP07949 1114 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 FOLR2P14207 255 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 SHMT2P34897 504 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 PKNOX1P55347 436 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 GNGT1P63211 74 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 UBE2IP63279 158 aaKnown RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 RELAQ04206 551 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 ZNF33BQ06732 778 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CLPPQ16740 277 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 PCK2Q16822 640 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 GGTA1PQ4G0N0 100 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CFAP157Q5JU67 520 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 WDR88Q6ZMY6 472 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 RNF165Q6ZSG1 346 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 ZCCHC23Q6ZST2 131 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 TMEM26Q6ZUK4 368 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 EFL1Q7Z2Z2 1120 aaKnown RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CRLF3Q8IUI8 442 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 BATF2Q8N1L9 274 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR6C4Q8NGE1 309 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR5AR1Q8NGP9 310 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR2L8Q8NGY9 312 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CCL4L1Q8NHW4 92 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 LMX1AQ8TE12 382 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 SLC37A2Q8TED4 501 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CXorf40BQ96DE9 158 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 WDR34Q96EX3 536 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 SORT1Q99523 831 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CCT7Q99832 543 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 SPAG8Q99932 426 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 ILKAPQ9H0C8 392 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 NSRP1Q9H0G5 558 aaKnown RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 TCEAL2Q9H3H9 227 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 EHD1Q9H4M9 534 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 IMP3Q9NV31 184 aaKnown RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 UTP6Q9NYH9 597 aaKnown RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 STOX2Q9P2F5 926 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 OPTCQ9UBM4 332 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 PCTPQ9UKL6 214 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 PSMD13Q9UNM6 376 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CNOT1A5YKK6 2376 aaKnown RBP3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 CCDC88CQ9P219 2028 aa3.9□□□□□ -1.79
HMGB3P19-201ENST00000403971 DMDP11532 3685 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 MYO15AQ9UKN7 3530 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 A0A1W2PPV9 198 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 NCF1BA6NI72 391 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR52A4PA6NMU1 304 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 NCF1CA8MVU1 366 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 NUDT21O43809 227 aaKnown RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 NME2P1O60361 137 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 VENTXO95231 258 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 CLDN9O95484 217 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 FAM107AO95990 144 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 ZNF806P0C7X5 589 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 ZCCHC18P0CG32 403 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 GIMD1P0DJR0 217 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 ALPPL2P10696 532 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 NCF1P14598 390 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 CXCR2P25025 360 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 NBL1P41271 181 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 BDKRB1P46663 353 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 RPL14P50914 215 aaKnown RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 CCNG1P51959 295 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 LMO4P61968 165 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 GABPB1Q06547 395 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 PRDX1Q06830 199 aaKnown RBP3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 C1orf61Q13536 156 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 CARTPTQ16568 116 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 CCSMST1Q4G0I0 132 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 C14orf28Q4W4Y0 310 aa3.89□□□□□ -1.79
HMGB3P19-201ENST00000403971 DDI2Q5TDH0 399 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms