RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SELEP16581 610 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 LBPP18428 481 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 CRATP43155 626 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 RAG2P55895 527 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SELENOVP59797 346 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MELKQ14680 651 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ZMYND11Q15326 602 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ALG10BQ5I7T1 473 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 DMRTA1Q5VZB9 504 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OLFML2AQ68BL7 652 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PXKQ7Z7A4 578 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PARP8Q8N3A8 854 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TRIML2Q8N7C3 387 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MNS1Q8NEH6 495 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OR1J1Q8NGS3 322 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OR6S1Q8NH40 331 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SLC25A40Q8TBP6 338 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ST7LQ8TDW4 575 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TPT1P8Q9HAU6 139 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MSL2Q9HCI7 577 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 BCL2L10Q9HD36 194 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TNFRSF19Q9NS68 423 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PNPOQ9NVS9 261 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TAS2R5Q9NYW4 299 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 GPR160Q9UJ42 338 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 FBXL3Q9UKT7 428 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ZNF232Q9UNY5 417 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 A0A0B4J2E0 115 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 A0A1B0GX12 115 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SDHDO14521 159 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 RFXANKO14593 260 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MGRN1O60291 552 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 KRT75O95678 551 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PRB2P02812 416 aaPredicted RBP9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PGA4P0DJD7 388 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PGA3P0DJD8 388 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 HOXB9P17482 250 aaPredicted RBP9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 AHCYP23526 432 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 LSP1P33241 339 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ANXA11P50995 505 aaKnown RBP9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ABCE1P61221 599 aaKnown RBP9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OGFOD2Q6N063 350 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ZNF774Q6NX45 483 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 BRICD5Q6PL45 260 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 BRD3OSQ6XYD6 125 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 Q6ZPA2 131 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 Q6ZR03 302 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 RFPL4BQ6ZWI9 263 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SLC35D2Q76EJ3 337 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 LRRC28Q86X40 367 aaPredicted RBP9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TREML1Q86YW5 311 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 POU5F2Q8N7G0 328 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OR52E2Q8NGJ4 325 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OR6X1Q8NH79 312 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SLC35B4Q969S0 331 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 UPRTQ96BW1 309 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 POM121L2Q96KW2 1035 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 CHIAQ9BZP6 476 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 BCL2L14Q9BZR8 327 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OR2J1Q9GZK6 312 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 POFUT1Q9H488 388 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MARCH7Q9H992 704 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 CALML5Q9NZT1 146 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 IFT52Q9Y366 437 aa9.97□□□□□ -0.81
SPTLC1P3-201ENST00000403408 IGKV1D-43A0A0B4J1Z2 117 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TRAV40A0A0B4J280 105 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ALX3O95076 343 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 NDUFA7O95182 113 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 LYPD3O95274 346 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 NGFP01138 241 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 THY1P04216 161 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 CD55P08174 381 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 QDPRP09417 244 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 CDH12P55289 794 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 OR1Q1Q15612 314 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 HIST3H3Q16695 136 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TBC1D28Q2M2D7 210 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 PABPC1L2AQ5JQF8 200 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 FIP1L1Q6UN15 594 aaKnown RBP9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 C5orf46Q6UWT4 87 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 C17orf107Q6ZR85 190 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 SLC16A14Q7RTX9 510 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TSPYL5Q86VY4 417 aaPredicted RBP9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 NUDCD3Q8IVD9 361 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ZNF283Q8N7M2 679 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 KLF14Q8TD94 323 aaPredicted RBP9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ZNF347Q96SE7 839 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 MRI1Q9BV20 369 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 ASPNQ9BXN1 380 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 RNF121Q9H920 327 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 PPCSQ9HAB8 311 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 MEAF6Q9HAF1 191 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 BEX1Q9HBH7 125 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 A4GALTQ9NPC4 353 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TMEM106BQ9NUM4 274 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 RPS6KB2Q9UBS0 482 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 TESQ9UGI8 421 aaKnown RBP9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 LGALS13Q9UHV8 139 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 HAO1Q9UJM8 370 aa9.96□□□□□ -0.82
SPTLC1P3-201ENST00000403408 CLPSL1A2RUU4 121 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms