RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 LHX3Q9UBR4 397 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 KDM3BQ7LBC6 1761 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 ALOX5APP20292 161 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 ELAVL3Q14576 367 aaKnown RBP9.02□□□□□ -0.97
HERC3-202ENST00000402738 PDLIM3Q53GG5 364 aaPredicted RBP9.02□□□□□ -0.97
HERC3-202ENST00000402738 LIPNQ5VXI9 398 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 TCTN3Q6NUS6 607 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 FAM57BQ71RH2 274 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 GRASPQ7Z6J2 395 aaPredicted RBP9.02□□□□□ -0.97
HERC3-202ENST00000402738 TMEM25Q86YD3 366 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 SLC22A24Q8N4F4 322 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 COMMD1Q8N668 190 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 ZFP62Q8NB50 900 aaPredicted RBP9.02□□□□□ -0.97
HERC3-202ENST00000402738 RAB7BQ96AH8 199 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 FGGYQ96C11 551 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 ZFYVE21Q9BQ24 234 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 C8orf33Q9H7E9 229 aaPredicted RBP9.02□□□□□ -0.97
HERC3-202ENST00000402738 VDAC3Q9Y277 283 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 PRRC2BQ5JSZ5 2229 aaKnown RBP9.02□□□□□ -0.97
HERC3-202ENST00000402738 A0A087X0M5 115 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 A0A1B0GX30 115 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 LRP3O75074 770 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 EPXP11678 715 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 HLA-DOBP13765 273 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 INSL4Q14641 139 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 TMEM31Q5JXX7 168 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 RAET1LQ5VY80 246 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 IL34Q6ZMJ4 242 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 ZNF620Q6ZNG0 422 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 GPR119Q8TDV5 335 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 POM121Q96HA1 1249 aa9.02□□□□□ -0.97
HERC3-202ENST00000402738 FGF20Q9NP95 211 aaPredicted RBP9.02□□□□□ -0.97
HERC3-202ENST00000402738 RYDENQ9NUL5 291 aaKnown RBP9.02□□□□□ -0.97
HERC3-202ENST00000402738 A0A1W2PQU0 124 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 ZNF727A8MUV8 499 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 CTNSO60931 367 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 SOD2P04179 222 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 PTHLHP12272 177 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 FCGR2AP12318 317 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 CXCL3P19876 107 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 SLC6A8P48029 635 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 ELLP55199 621 aaPredicted RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 GBX1Q14549 363 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 MANEAQ5SRI9 462 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 C11orf87Q6NUJ2 197 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 TIPARPQ7Z3E1 657 aaKnown RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 CPXM2Q8N436 756 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 OR5AP2Q8NGF4 316 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 LILRB1Q8NHL6 650 aaPredicted RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 PDXPQ96GD0 296 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 ZNF75AQ96N20 296 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 CXCL16Q9H2A7 254 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 SLC6A13Q9NSD5 602 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 STARD5Q9NSY2 213 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 PLEK2Q9NYT0 353 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 MYO5AQ9Y4I1 1855 aaKnown RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 SFTPDP35247 375 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 ZNF93P35789 620 aaPredicted RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 PRLHRP49683 370 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 SELENOPP49908 381 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 RPS21P63220 83 aaKnown RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 HBG1P69891 147 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 HBG2P69892 147 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 ARHGAP19Q14CB8 494 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 CCSMST1Q4G0I0 132 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 ZNF385BQ569K4 471 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 MMP21Q8N119 569 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 INTS12Q96CB8 462 aaKnown RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 KIRREL1Q96J84 757 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 LINC00597Q9H2U6 94 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 SERTAD3Q9UJW9 196 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 FBXO4Q9UKT5 387 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 ST8SIA3O43173 380 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 IL5P05113 134 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 C1SP09871 688 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 BCKDHBP21953 392 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 RPL29P47914 159 aaKnown RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 KCNJ3P48549 501 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 BAXQ07812 192 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 PJVKQ0ZLH3 352 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 LCN15Q6UWW0 184 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 TRILQ7L0X0 811 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 MRPL10Q7Z7H8 261 aaKnown RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 SERINC5Q86VE9 423 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 ZNF761Q86XN6 746 aaPredicted RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 LINC00346Q8IVM7 164 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 OR4C5Q8NGB2 326 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 OR8U1Q8NH10 309 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 TSACCQ96A04 125 aaPredicted RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 MEGF10Q96KG7 1140 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 WDR92Q96MX6 357 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 UHRF2Q96PU4 802 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 BCO1Q9HAY6 547 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 LAMP3Q9UQV4 416 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 B3GALT5Q9Y2C3 310 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 STRAPQ9Y3F4 350 aaKnown RBP9.01□□□□□ -0.97
HERC3-202ENST00000402738 V9GYH0 126 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 ARID1AO14497 2285 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 DPP4P27487 766 aa9.01□□□□□ -0.97
HERC3-202ENST00000402738 CTBSQ01459 385 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms