RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 C12orf71A8MTZ7 269 aa10.4□□□□□ -0.74
SKA3-203ENST00000400018 E9PI62 339 aa10.4□□□□□ -0.74
SKA3-203ENST00000400018 ETV2O00321 342 aaPredicted RBP10.4□□□□□ -0.74
SKA3-203ENST00000400018 ZNF208O43345 1280 aa10.4□□□□□ -0.74
SKA3-203ENST00000400018 TRAF3IP2O43734 574 aaPredicted RBP10.4□□□□□ -0.74
SKA3-203ENST00000400018 CEACAM4O75871 244 aa10.4□□□□□ -0.74
SKA3-203ENST00000400018 EIF1P41567 113 aaKnown RBP10.4□□□□□ -0.74
SKA3-203ENST00000400018 PRPS1P60891 318 aa10.4□□□□□ -0.74
SKA3-203ENST00000400018 RPL27P61353 136 aaKnown RBP10.4□□□□□ -0.74
SKA3-203ENST00000400018 SNRPGP62308 76 aaKnown RBP10.4□□□□□ -0.74
SKA3-203ENST00000400018 IL18R1Q13478 541 aa10.4□□□□□ -0.74
SKA3-203ENST00000400018 LINC00303Q3SY05 128 aa10.4□□□□□ -0.74
SKA3-203ENST00000400018 ZNF773Q6PK81 442 aa10.4□□□□□ -0.74
SKA3-203ENST00000400018 DDOQ99489 341 aa10.4□□□□□ -0.74
SKA3-203ENST00000400018 C12orf4Q9NQ89 552 aa10.4□□□□□ -0.74
SKA3-203ENST00000400018 MRPL39Q9NYK5 338 aaKnown RBP10.4□□□□□ -0.74
SKA3-203ENST00000400018 WARS2Q9UGM6 360 aaKnown RBP10.4□□□□□ -0.74
SKA3-203ENST00000400018 TRGV5A0A0B4J1U4 118 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 OR2T1O43869 369 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 CDK1P06493 297 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 ZNF43P17038 809 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 LIPAP38571 399 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 PSMB10P40306 273 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 PRSS12P56730 875 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 ZNF169Q14929 603 aaPredicted RBP10.4□□□□□ -0.75
SKA3-203ENST00000400018 TP53I3Q53FA7 332 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 RBM48Q5RL73 367 aaKnown RBP10.4□□□□□ -0.75
SKA3-203ENST00000400018 TMEM81Q6P7N7 255 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 TUSC5Q8IXB3 177 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 TMEM178AQ8NBL3 297 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 ZNF420Q8TAQ5 688 aaPredicted RBP10.4□□□□□ -0.75
SKA3-203ENST00000400018 ARHGAP9Q9BRR9 750 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 SEC61A2Q9H9S3 476 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 NEK6Q9HC98 313 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 EMC7Q9NPA0 242 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 ACOT13Q9NPJ3 140 aa10.4□□□□□ -0.75
SKA3-203ENST00000400018 PRODHO43272 600 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 CLPXO76031 633 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ALX3O95076 343 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 CXCR4P61073 352 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 TSC22D1Q15714 1073 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.39□□□□□ -0.75
SKA3-203ENST00000400018 DMRTC1Q5HYR2 192 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ARMC4Q5T2S8 1044 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 DPY19L4Q7Z388 723 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 AKAP14Q86UN6 197 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ANKRD13BQ86YJ7 626 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 LRRC18Q8N456 261 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ARIH2OSQ8N7S6 290 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ZIC4Q8N9L1 334 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 Q8NA96 180 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 HSD17B8Q92506 261 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 TM9SF4Q92544 642 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ORAI1Q96D31 301 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ADGRG7Q96K78 797 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 DCLRE1CQ96SD1 692 aaKnown RBP10.39□□□□□ -0.75
SKA3-203ENST00000400018 ALG12Q9BV10 488 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 A0A1W2PQL4 384 aaPredicted RBP10.39□□□□□ -0.75
SKA3-203ENST00000400018 XKRYO14609 159 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 TSPAN9O75954 239 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 SLC2A5P22732 501 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 SLC15A1P46059 708 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 OR12D2P58182 307 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 PSPHP78330 225 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 LINC01590Q5TEZ4 76 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ZNF585AQ6P3V2 769 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ARHGAP11AQ6P4F7 1023 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 IGFL2Q6UWQ7 119 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 MEPCEQ7L2J0 689 aaKnown RBP10.39□□□□□ -0.75
SKA3-203ENST00000400018 LINGO2Q7L985 606 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 SLC22A16Q86VW1 577 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 UEVLDQ8IX04 471 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 EXD3Q8N9H8 876 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 OR2V1Q8NHB1 315 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ZNF519Q8TB69 540 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ASB10Q8WXI3 467 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 OR2B2Q9GZK3 357 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 C12orf10Q9HB07 376 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 ADGRL4Q9HBW9 690 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 BRD7Q9NPI1 651 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 B4GALT7Q9UBV7 327 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 KCNG2Q9UJ96 466 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 TPRKBQ9Y3C4 175 aa10.39□□□□□ -0.75
SKA3-203ENST00000400018 SIRT4Q9Y6E7 314 aaPredicted RBP10.39□□□□□ -0.75
SKA3-203ENST00000400018 ICE1Q9Y2F5 2266 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 SPTBN1Q01082 2364 aaKnown RBP10.38□□□□□ -0.75
SKA3-203ENST00000400018 TRAV17A0A0B4J275 112 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 A0A1W2PRG6 482 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 SLC22A23A1A5C7 686 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 PRSS37A4D1T9 235 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 MKRN2OSH3BPM6 223 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 UPK3AO75631 287 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 RPP14O95059 124 aaKnown RBP10.38□□□□□ -0.75
SKA3-203ENST00000400018 HMGN1P05114 100 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 HPNP05981 417 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 CCDC159P0C7I6 412 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 LIMS3P0CW19 117 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 LIMS4P0CW20 117 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 SIRPAP78324 504 aa10.38□□□□□ -0.75
SKA3-203ENST00000400018 H3F3AP84243 136 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms