RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 RAB3AP20336 220 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 SPEM2Q0P670 501 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 LYPD4Q6UWN0 246 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 TMEM17Q86X19 198 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 AKAP1Q92667 903 aaKnown RBP eCLIP12.71□□□□□ -0.38
SCAF4-202ENST00000399804 EMC7Q9NPA0 242 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 AKIP1Q9NQ31 210 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 NTMQ9P121 344 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 HSPB11Q9Y547 144 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 B3GALT1Q9Y5Z6 326 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 PLXNA4Q9HCM2 1894 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 ENPP1P22413 925 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 S100A1P23297 94 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 OR10A3P58181 314 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 RPS18P62269 152 aaKnown RBP12.7□□□□□ -0.38
SCAF4-202ENST00000399804 PCGF3Q3KNV8 242 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 FHL5Q5TD97 284 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 ARSKQ6UWY0 536 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 WDR5BQ86VZ2 330 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 OR4M1Q8NGD0 313 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 FLVCR1-AS1Q8TAF5 88 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 PHYHIPQ92561 330 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 ITPKCQ96DU7 683 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 POTEKPQ9BYX7 375 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 BCL2L14Q9BZR8 327 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 CACNG2Q9Y698 323 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 MEIOCA2RUB1 952 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 C4orf47A7E2U8 309 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 FAM166BA8MTA8 275 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 NAGAP17050 411 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 RFC3P40938 356 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 SUMO3P55854 103 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-202ENST00000399804 MGAT2Q10469 447 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 CDNFQ49AH0 187 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 CCDC58Q4VC31 144 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 GLB1L2Q8IW92 636 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 TIGD4Q8IY51 512 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 SAP25Q8TEE9 199 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 ZNF721Q8TF20 911 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 LANCL2Q9NS86 450 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 CD79AP11912 226 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 CD79BP40259 229 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 GABREP78334 506 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 ATG4DQ86TL0 474 aaPredicted RBP12.7□□□□□ -0.38
SCAF4-202ENST00000399804 TAAR9Q96RI9 348 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 EXOSC3Q9NQT5 275 aaKnown RBP12.7□□□□□ -0.38
SCAF4-202ENST00000399804 PILRBQ9UKJ0 227 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 CACNA1GO43497 2377 aa12.7□□□□□ -0.38
SCAF4-202ENST00000399804 SLC43A1O75387 559 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 SKP2Q13309 424 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 GPR155Q7Z3F1 870 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 PIAS4Q8N2W9 510 aaPredicted RBP12.69□□□□□ -0.38
SCAF4-202ENST00000399804 OR51D1Q8NGF3 324 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 OR52A1Q9UKL2 312 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 A0A1W2PQM1 296 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 QDPRP09417 244 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 FKBP2P26885 142 aaKnown RBP12.69□□□□□ -0.38
SCAF4-202ENST00000399804 GIFP27352 417 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 IL10RAQ13651 578 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 THOC7Q6I9Y2 204 aaKnown RBP12.69□□□□□ -0.38
SCAF4-202ENST00000399804 DNAAF1Q8NEP3 725 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 NUBPLQ8TB37 319 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 LIN7BQ9HAP6 207 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 P4HTMQ9NXG6 502 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 ASH2LQ9UBL3 628 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 SLC22A13Q9Y226 551 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 DSPPQ9NZW4 1301 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 A0A0G2JMP0 313 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 A0A0X1KG70 313 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 DISC1C4P0D8 188 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 RFPL3O75679 317 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 GABRB1P18505 474 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 PTH2RP49190 550 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 MYBPHQ13203 477 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 PLPP7Q8NBV4 271 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 OR4M2Q8NGB6 313 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 CASTOR1Q8WTX7 329 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 CLDN23Q96B33 292 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 PELI1Q96FA3 418 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 ADGRL4Q9HBW9 690 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 TAS2R8Q9NYW2 309 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 NOP16Q9Y3C1 178 aaKnown RBP12.69□□□□□ -0.38
SCAF4-202ENST00000399804 SEMA7AO75326 666 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 RAB40ALP0C0E4 278 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 ELK1P19419 428 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 CAPZA1P52907 286 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 SLC22A6Q4U2R8 563 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 RNASE10Q5GAN6 216 aaKnown RBP12.69□□□□□ -0.38
SCAF4-202ENST00000399804 OLFML2AQ68BL7 652 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 ZNF679Q8IYX0 411 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 CELF2-AS1Q8N7Q2 184 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 MFSD8Q8NHS3 518 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 RAB40AQ8WXH6 277 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 ACTR6Q9GZN1 396 aa12.69□□□□□ -0.38
SCAF4-202ENST00000399804 C11orf54Q9H0W9 315 aaPredicted RBP12.69□□□□□ -0.38
SCAF4-202ENST00000399804 ZNF701Q9NV72 531 aaPredicted RBP12.69□□□□□ -0.38
SCAF4-202ENST00000399804 IGHV3-15A0A0B4J1V0 119 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 E9PI62 339 aa12.68□□□□□ -0.38
SCAF4-202ENST00000399804 H0YC42 278 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms