RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 FNDC8Q8TC99 324 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 KCNK17Q96T54 332 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 SH3GL3Q99963 347 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 VRK1Q99986 396 aaPredicted RBP12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 ALG12Q9BV10 488 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 RAB1BQ9H0U4 201 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 C1orf198Q9H425 327 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 RHCGQ9UBD6 479 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 ENPP4Q9Y6X5 453 aa12.84□□□□□ -0.35
SMIM11A-203ENST00000399299 VWC2LB2RUY7 222 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 LY6HO94772 140 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 NCK1P16333 377 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 RPL27P61353 136 aaKnown RBP12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 MRPS34P82930 218 aaKnown RBP12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 MYBPC1Q00872 1141 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 GALK2Q01415 458 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 FHL1Q13642 323 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 FXNQ16595 210 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 ZNF730Q6ZMV8 503 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 TMPRSS11FQ6ZWK6 438 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 SLC16A14Q7RTX9 510 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 TSEN54Q7Z6J9 526 aaKnown RBP12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 SVOPLQ8N434 492 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 LRRC75AQ8NAA5 344 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 HDAC2Q92769 488 aaKnown RBP12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 MRPL24Q96A35 216 aaKnown RBP12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 TNFRSF13CQ96RJ3 184 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 NMNAT1Q9HAN9 279 aaPredicted RBP12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 DCAF13Q9NV06 445 aaKnown RBP12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 SLC7A8Q9UHI5 535 aa12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 SAMD4AQ9UPU9 718 aaKnown RBP12.83□□□□□ -0.36
SMIM11A-203ENST00000399299 A0A1W2PRQ8 180 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 EFCAB9A8MZ26 197 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 GPRIN2O60269 458 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 PTHP01270 115 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 ERCC1P07992 297 aaPredicted RBP12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 PATE4P0C8F1 98 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 HSD17B1P14061 328 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 GNGT1P63211 74 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 VLDLRP98155 873 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 CD47Q08722 323 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 DGCR6Q14129 220 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 TMEM249Q2WGJ8 235 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 THEM4Q5T1C6 240 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 GLYATQ6IB77 296 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 PIGWQ7Z7B1 504 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 OAFQ86UD1 273 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 CDK20Q8IZL9 346 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 ANKS4BQ8N8V4 417 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 SLC30A7Q8NEW0 376 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 NEU4Q8WWR8 484 aaPredicted RBP12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 PIMREGQ9BSJ6 248 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 GORASP2Q9H8Y8 452 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 SIAEQ9HAT2 523 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 EGFL7Q9UHF1 273 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 TMEM5Q9Y2B1 443 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 ARL2BPQ9Y2Y0 163 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 UGT2A1Q9Y4X1 527 aa12.82□□□□□ -0.36
SMIM11A-203ENST00000399299 RTTNQ86VV8 2226 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 TRAV27A0A087WT01 109 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 LOC390937A0A1W2PQ73 354 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 SLC22A23A1A5C7 686 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 A6NIZ1 184 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 SYNGR3O43761 229 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 CRLF1O75462 422 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 GMNNO75496 209 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 DCTN3O75935 186 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 SLC2A10O95528 541 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 SNAP29O95721 258 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 H1F0P07305 194 aaKnown RBP12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 MMP7P09237 267 aaPredicted RBP12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 RHCEP18577 417 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 USF1P22415 310 aaPredicted RBP12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 CTXN1P60606 82 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 RAP1BP61224 184 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 RAP1AP62834 184 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 FMODQ06828 376 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 TOP3AQ13472 1001 aaPredicted RBP12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 MSMPQ1L6U9 139 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 GKAP1Q5VSY0 366 aaPredicted RBP12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 SLC25A47Q6Q0C1 308 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 RRM2BQ7LG56 351 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 PGAM4Q8N0Y7 254 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 RBM15BQ8NDT2 890 aaKnown RBP12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 OR1J2Q8NGS2 313 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 OR13C2Q8NGS9 318 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 OR51A7Q8NH64 312 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 ZNF519Q8TB69 540 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 SLC7A13Q8TCU3 470 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 NABP1Q96AH0 204 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 C7orf34Q96L11 122 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 LRRC37BQ96QE4 947 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 RBP7Q96R05 134 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 MRPL37Q9BZE1 423 aaKnown RBP12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 RNF121Q9H920 327 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 DYNLRB1Q9NP97 96 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 ADA2Q9NZK5 511 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 NDUFAF4Q9P032 175 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 MAGEL2Q9UJ55 1249 aa12.81□□□□□ -0.36
SMIM11A-203ENST00000399299 ZNF346Q9UL40 294 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms