RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 F12P00748 615 aaPredicted RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 CD8AP01732 235 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 CCKBRP32239 447 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 DHRS2Q13268 280 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 RAB11BQ15907 218 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 ELOA3BQ3SY89 546 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 ATPAF1Q5TC12 328 aaPredicted RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 RAB12Q6IQ22 244 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 DPY19L4Q7Z388 723 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 PLPP7Q8NBV4 271 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 ELOA3Q8NG57 546 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 ALX4Q9H161 411 aaPredicted RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 KIR3DX1Q9H7L2 352 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 WDR76Q9H967 626 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 MYEF2Q9P2K5 600 aaKnown RBP12.68□□□□□ -0.38
APOB-202ENST00000399256 COLEC10Q9Y6Z7 277 aa12.68□□□□□ -0.38
APOB-202ENST00000399256 CHD9Q3L8U1 2897 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 A0A087WUJ7 227 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 OR14I1A6ND48 311 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 F5H0A9 414 aaPredicted RBP12.67□□□□□ -0.38
APOB-202ENST00000399256 OR2F2O95006 317 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 AKR7A3O95154 331 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 H2AFB1P0C5Y9 115 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 TAS2R19P59542 299 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 OR2F1Q13607 317 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 PAN3Q58A45 887 aaKnown RBP12.67□□□□□ -0.38
APOB-202ENST00000399256 TMEM205Q6UW68 189 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 RAB11FIP2Q7L804 512 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 ZNF550Q7Z398 422 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 CDC20BQ86Y33 519 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 SPPL3Q8TCT6 385 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 GPX8Q8TED1 209 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 PPP1R1CQ8WVI7 109 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 ASB13Q8WXK3 278 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 POTEKPQ9BYX7 375 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.67□□□□□ -0.38
APOB-202ENST00000399256 PLEKHA6Q9Y2H5 1048 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 CACNA1CQ13936 2221 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 HLA-AP01891 365 aaKnown RBP12.67□□□□□ -0.38
APOB-202ENST00000399256 ZNF28P17035 718 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 RAB13P51153 203 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 CAPZA1P52907 286 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 CTXN1P60606 82 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 ENPP7Q6UWV6 458 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 ABHD13Q7L211 337 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 SVBPQ8N300 66 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 CAMKVQ8NCB2 501 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 POLE3Q9NRF9 147 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 PILRAQ9UKJ1 303 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 DTX4Q9Y2E6 619 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 XIRP2A4UGR9 3374 aa12.67□□□□□ -0.38
APOB-202ENST00000399256 A0A1B0GTI1 187 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 PRR19A6NJB7 356 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 HRKO00198 91 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 OR10H2O60403 315 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 KIR3DL2P43630 455 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 ACTBP60709 375 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 ACTG1P63261 375 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 SCRN3Q0VDG4 424 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 RD3Q7Z3Z2 195 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 GATSQ8NAP1 163 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 C2CD4CQ8TF44 421 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 SEH1LQ96EE3 360 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 AMELYQ99218 206 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 FGF22Q9HCT0 170 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 STARD5Q9NSY2 213 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 COA4Q9NYJ1 87 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 SLC17A4Q9Y2C5 497 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 LOC100289279A0A1B0GTE1 492 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 URADA6NGE7 173 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 C5orf67F2Z3F1 127 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 CYR61O00622 381 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 FADS1O60427 444 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 PVRP15151 417 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 ADPRHP54922 357 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 RPS4XP62701 263 aaKnown RBP12.66□□□□□ -0.38
APOB-202ENST00000399256 SRSF3P84103 164 aaKnown RBP12.66□□□□□ -0.38
APOB-202ENST00000399256 DMWDQ09019 674 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 SGCGQ13326 291 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 ZNF345Q14585 488 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 CST6Q15828 149 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 NKPD1Q17RQ9 610 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 WDR38Q5JTN6 314 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 FCRL6Q6DN72 434 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 VITQ6UXI7 678 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 PM20D2Q8IYS1 436 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 PPP1R14AQ96A00 147 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 DNAJA3Q96EY1 480 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 FOXN4Q96NZ1 517 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 MOGAT1Q96PD6 335 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 GAREM1Q9H706 876 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 SPACA6W5XKT8 324 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 TMEM212A6NML5 194 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 OR2AT4A6NND4 320 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 CSTAP01040 98 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 ZNF10P21506 573 aaPredicted RBP12.66□□□□□ -0.38
APOB-202ENST00000399256 CD96P40200 585 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 PBX2P40425 430 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 CASRP41180 1078 aa12.66□□□□□ -0.38
APOB-202ENST00000399256 GRK6P43250 576 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms