RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 HLA-GP17693 338 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 DDOSTP39656 456 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 PCOLCEQ15113 449 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 DEFB133Q30KQ1 61 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CCNJQ5T5M9 372 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 PGAP1Q75T13 922 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 MARCH9Q86YJ5 346 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ELMOD2Q8IZ81 293 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 TCTE3Q8IZS6 198 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 C19orf18Q8NEA5 215 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 S100A16Q96FQ6 103 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 FER1L6-AS2Q96M78 137 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SLC2A8Q9NY64 477 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SLC22A23A1A5C7 686 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 HMX3A6NHT5 357 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ZFPL1O95159 310 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CRHP06850 196 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 PTGER4P35408 488 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 MPLP40238 635 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 FOLR3P41439 243 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 GPR176Q14439 515 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SLC17A1Q14916 467 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SPSB1Q96BD6 273 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 Q96M85 177 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 PIGQQ9BRB3 760 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SEBOXQ9HB31 216 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ATP13A2Q9NQ11 1180 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 PPP4R1LQ9P1A2 415 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 GPN3Q9UHW5 284 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 TEX13CA0A0J9YWL9 993 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CCDC182A6NF36 153 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 TUBAL3A6NHL2 446 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ITGB2P05107 769 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 GABRA1P14867 456 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 GRPRP30550 384 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CASP3P42574 277 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 PITPNBP48739 271 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SSR4P51571 173 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 RIDAP52758 137 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ACKR1Q16570 336 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 LIPNQ5VXI9 398 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 STEAP3Q658P3 488 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF529Q6P280 563 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ANKRD16Q6P6B7 361 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 MARVELD3Q96A59 401 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 GTPBP2Q9BX10 602 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SPRTNQ9H040 489 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 C1orf198Q9H425 327 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 NSG1A0A0A6YYJ2 146 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 FAM240BA0A1B0GVZ2 78 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 HOXD4P09016 255 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 MAOAP21397 527 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 S100GP29377 79 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 NR0B1P51843 470 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ALKBH1Q13686 389 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 MPPED2Q15777 294 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 Q6ZPB1 254 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CADM2Q8N3J6 435 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF614Q8N883 585 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 OR11G2Q8NGC1 345 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ST7LQ8TDW4 575 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 VRK1Q99986 396 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 YIPF4Q9BSR8 244 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ACKR4Q9NPB9 350 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 TRBV2A0A0J9YWF9 115 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 OR6C68A6NDL8 312 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 PLPP3O14495 311 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 RGS5O15539 181 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 MLF1P58340 268 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ANKRD34AQ69YU3 496 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 THOC7Q6I9Y2 204 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 APOOLQ6UXV4 268 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 NDUFAF7Q7L592 441 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ZAR1Q86SH2 424 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 MAFAQ8NHW3 353 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 GUCD1Q96NT3 240 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 GAREM1Q9H706 876 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 HS3ST3B1Q9Y662 390 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 EIF1AYO14602 144 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 UPK3AO75631 287 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CDRT1O95170 752 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CSF1P09603 554 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF823P16415 610 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 EIF1AXP47813 144 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 RPS3AP61247 264 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 RPL19P84098 196 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 FABP5Q01469 135 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 GFOD2Q3B7J2 385 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ARRDC1Q8N5I2 433 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 LSM14AQ8ND56 463 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 SLX1AQ9BQ83 275 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 CHST6Q9GZX3 395 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 ZFP64Q9NPA5 681 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 RHBDL2Q9NX52 303 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 NOP16Q9Y3C1 178 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 V9GY05 133 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 NAV2Q8IVL1 2488 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 A0A0B4J2A0 478 aa5.28□□□□□ -1.56
PTPRD-206ENST00000397617 GSTP1P09211 210 aaKnown RBP5.28□□□□□ -1.56
PTPRD-206ENST00000397617 RPS7P62081 194 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms