RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 NPAS1Q99742 590 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 DEFB126Q9BYW3 111 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 HRASLSQ9HDD0 168 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 LANCL2Q9NS86 450 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 HAO2Q9NYQ3 351 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 FBXL3Q9UKT7 428 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 ICAM5Q9UMF0 924 aa9.44□□□□□ -0.9
CPSF1P1-201ENST00000397477 FREM3P0C091 2139 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 TMEM269A0A1B0GVZ9 245 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 FITM1A5D6W6 292 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 OGG1O15527 345 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 PSMB1P20618 241 aaKnown RBP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 MST1P26927 711 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 LCN1P31025 176 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLC6A8P48029 635 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 GLO1Q04760 184 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 RAB11BQ15907 218 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 NKAIN1Q4KMZ8 207 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLC35D3Q5M8T2 416 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 WDR45BQ5MNZ6 344 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 GLYATL3Q5SZD4 288 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLC22A10Q63ZE4 541 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 GUSBP11Q6P575 273 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 ZNF101Q8IZC7 436 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 FAM181AQ8N9Y4 354 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 OR56B4Q8NH76 319 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 RABL2AQ9UBK7 228 aaPredicted RBP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 HIF3AQ9Y2N7 669 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 FRG2CA6NGY1 282 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 POM121CA8CG34 1229 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 M0QYG6 137 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 DDAH2O95865 285 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 C1QBP02746 253 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 CSF2RBP32927 897 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 CCR9P51686 369 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 NXPH1P58417 271 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 TAS2R20P59543 309 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 DMWDQ09019 674 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 OVCH1Q7RTY7 1134 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 CD163Q86VB7 1156 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 OR4K17Q8NGC6 315 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 OR11H7Q8NGC8 314 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 DDOQ99489 341 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 GDF15Q99988 308 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 PDCD10Q9BUL8 212 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 APMAPQ9HDC9 416 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 TAS2R4Q9NYW5 299 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 RARRES3Q9UL19 164 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 MMACHCQ9Y4U1 282 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 KIF26BQ2KJY2 2108 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 NUP210Q8TEM1 1887 aaPredicted RBP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 NPIPB9F8W1W9 429 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 I3L521 148 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 ZNF780AO75290 641 aaPredicted RBP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLC6A9P48067 706 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 POLR2HP52434 150 aaKnown RBP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 EFNB2P52799 333 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 BIDP55957 195 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 RPL27P61353 136 aaKnown RBP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 SGCAQ16586 387 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 LINC01590Q5TEZ4 76 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLC25A45Q8N413 288 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 ZNF721Q8TF20 911 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 TMEM234Q8WY98 164 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 RGP1Q92546 391 aaPredicted RBP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 ZNF578Q96N58 590 aaPredicted RBP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 ZNF426Q9BUY5 554 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 LAT2Q9GZY6 243 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 DUSP15Q9H1R2 295 aaPredicted RBP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLA2Q9H6Q3 261 aa9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 FBXO9Q9UK97 447 aaPredicted RBP9.43□□□□□ -0.9
CPSF1P1-201ENST00000397477 TRAV1-2A0A0B4J238 106 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 PRSS37A4D1T9 235 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 VSTM2BA6NLU5 285 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 A8MVM7 634 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 HSD11B1P28845 292 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 GNG2P59768 71 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 RPS11P62280 158 aaKnown RBP eCLIP9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 RNF4P78317 190 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 FHL1Q13642 323 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 EEF1A1P5Q5VTE0 462 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 GPR139Q6DWJ6 353 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 PLCZ1Q86YW0 608 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 ZFAND1Q8TCF1 268 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 MR1Q95460 341 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 FAM71F1Q96KD3 344 aaPredicted RBP9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 RBP7Q96R05 134 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 MOKQ9UQ07 419 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 PCDH15Q96QU1 1955 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 A0A1B0GVI7 797 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 MASP2O00187 686 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 PEX14O75381 377 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 FAUP35544 74 aaKnown RBP9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 FOXK1P85037 733 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 LINC00303Q3SY05 128 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 SLC36A2Q495M3 483 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 PXKQ7Z7A4 578 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 OR1N1Q8NGS0 311 aa9.42□□□□□ -0.9
CPSF1P1-201ENST00000397477 SUN5Q8TC36 379 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms