RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PDP1Q9P0J1 537 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-206ENST00000397408 ARRDC5A6NEK1 342 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 DEAF1O75398 565 aaPredicted RBP18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 CD79AP11912 226 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 APEHP13798 732 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 THEM4Q5T1C6 240 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 RPL13AP3Q6NVV1 102 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 SLC25A47Q6Q0C1 308 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 PAMR1Q6UXH9 720 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 RASSF6Q6ZTQ3 369 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 MDP1Q86V88 176 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 PIAS4Q8N2W9 510 aaPredicted RBP18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 OR52L1Q8NGH7 329 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 NANOS1Q8WY41 292 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 FEVQ99581 238 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 NIPSNAP1Q9BPW8 284 aa18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 MOV10Q9HCE1 1003 aaKnown RBP18.48■□□□□ 0.55
TSPAN4-206ENST00000397408 IGHV1-18A0A0C4DH31 117 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 SLC22A23A1A5C7 686 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 PRSS37A4D1T9 235 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 ENTPD5O75356 428 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 FARS2O95363 451 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 TXNDC12O95881 172 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 OR8G3PP0DMU2 310 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 GSTM3P21266 225 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 PAX7P23759 505 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 CDAP32320 146 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 CLEC12AQ5QGZ9 265 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 ADCK1Q86TW2 530 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 HS3ST5Q8IZT8 346 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 AKAP1Q92667 903 aaKnown RBP eCLIP18.47■□□□□ 0.557e-7■■■■□ 20.3
TSPAN4-206ENST00000397408 DUS3LQ96G46 650 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 SLC38A2Q96QD8 506 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 SH3GL3Q99963 347 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 PLA2G12AQ9BZM1 189 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 NOX3Q9HBY0 568 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 ARMC1Q9NVT9 282 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 ZNF224Q9NZL3 707 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 ST6GALNAC2Q9UJ37 374 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 PLEKHA6Q9Y2H5 1048 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 UGT2A1Q9Y4X1 527 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 AP4S1Q9Y587 144 aa18.47■□□□□ 0.55
TSPAN4-206ENST00000397408 PLCE1Q9P212 2302 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 SOX14O95416 240 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 CBR1P16152 277 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 IDH3GP51553 393 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 PIGFQ07326 219 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 NPRL3Q12980 569 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 KPNB1Q14974 876 aaKnown RBP18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 PTCHD4Q6ZW05 846 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 SKA3Q8IX90 412 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 OR8D4Q8NGM9 314 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 LILRB1Q8NHL6 650 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 NEUROG1Q92886 237 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 SYT4Q9H2B2 425 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 DENND2DQ9H6A0 471 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 TBC1D23Q9NUY8 699 aa18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 CRNNQ9UBG3 495 aaPredicted RBP18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 HEATR1Q9H583 2144 aaKnown RBP18.46■□□□□ 0.55
TSPAN4-206ENST00000397408 SHISA9B4DS77 424 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 IMPA2O14732 288 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 HS3ST1O14792 307 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 ARPC3O15145 178 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 AHCYL1O43865 530 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 UBL3O95164 117 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 IGKV3-15P01624 115 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 IGLV1-44P01699 117 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 CELA3BP08861 270 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 CECR9P0C854 216 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 NOS3P29474 1203 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 CDH11P55287 796 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 ACTR3P61158 418 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 MRPS34P82930 218 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 ATP6AP1Q15904 470 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 GSG1Q2KHT4 349 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 NRN1LQ496H8 165 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 SLC22A25Q6T423 547 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 JAZF1Q86VZ6 243 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 FAM169BQ8N8A8 192 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 SEC61A2Q9H9S3 476 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 NTN4Q9HB63 628 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 B3GNT2Q9NY97 397 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 IL20Q9NYY1 176 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 EDARQ9UNE0 448 aa18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 RAI1Q7Z5J4 1906 aaPredicted RBP18.45■□□□□ 0.54
TSPAN4-206ENST00000397408 A0A1W2PPL8 197 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 RAF1P04049 648 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 IGFBP1P08833 259 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 PATE4P0C8F1 98 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 CTLA4P16410 223 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 FASP25445 335 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 ARR3P36575 388 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 CDKN2AP42771 156 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 PTDSS1P48651 473 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 ARHGDIAP52565 204 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 KEAP1Q14145 624 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 C3orf36Q3SXR2 165 aa18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 ZNF672Q499Z4 452 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 SHQ1Q6PI26 577 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-206ENST00000397408 CD300LDQ6UXZ3 194 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms