RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 THUMPD1Q9NXG2 353 aaKnown RBP7.94□□□□□ -1.14
NEDD9-203ENST00000397378 MRPL39Q9NYK5 338 aaKnown RBP7.94□□□□□ -1.14
NEDD9-203ENST00000397378 UBAP1Q9NZ09 502 aa7.94□□□□□ -1.14
NEDD9-203ENST00000397378 RPS6KB2Q9UBS0 482 aa7.94□□□□□ -1.14
NEDD9-203ENST00000397378 INSIG2Q9Y5U4 225 aa7.94□□□□□ -1.14
NEDD9-203ENST00000397378 TET2Q6N021 2002 aaPredicted RBP7.94□□□□□ -1.14
NEDD9-203ENST00000397378 COL7A1Q02388 2944 aa7.94□□□□□ -1.14
NEDD9-203ENST00000397378 A0A1B0GWA3 101 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 ISPDA4D126 451 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 A8MXK9 166 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 TRAPPC2LH3BP13 241 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 CLPXO76031 633 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 IGHV1-46P01743 117 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 BGLAPP02818 100 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 OPN1MWP04001 364 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 MYZAPP0CAP1 466 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 OPN1MW2P0DN77 364 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 OPN1MW3P0DN78 364 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 CCL2P13500 99 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 MAKP20794 623 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 DRD4P21917 467 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 CBLP22681 906 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 IL12AP29459 219 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 CSNK1A1P48729 337 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 MMP15P51511 669 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 UFM1P61960 85 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 PMS2P3Q13401 168 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 TBC1D28Q2M2D7 210 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 ALG10BQ5I7T1 473 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 RPS26P11Q5JNZ5 115 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-203ENST00000397378 FAM91A1Q658Y4 838 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 OGFOD2Q6N063 350 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 TMEM53Q6P2H8 277 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 WDR88Q6ZMY6 472 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 PARP8Q8N3A8 854 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 ZNF781Q8N8C0 355 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 EIF1ADQ8N9N8 165 aaKnown RBP7.93□□□□□ -1.14
NEDD9-203ENST00000397378 OR1J2Q8NGS2 313 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 TMEM54Q969K7 222 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 TMEM19Q96HH6 336 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 EPYCQ99645 322 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 ASPNQ9BXN1 380 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 EGLN1Q9GZT9 426 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 LRMDAQ9H2I8 198 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 OR51B6Q9H340 312 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 MARCH7Q9H992 704 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 BCL2L10Q9HD36 194 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 SLC6A13Q9NSD5 602 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 TMEM38BQ9NVV0 291 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 GLTPQ9NZD2 209 aa7.93□□□□□ -1.14
NEDD9-203ENST00000397378 TMEM247A6NEH6 219 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 SRRM5B3KS81 715 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 PLPP3O14495 311 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 RFXANKO14593 260 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 ITM2AO43736 263 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 SPAG7O75391 227 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 FARS2O95363 451 aaKnown RBP7.92□□□□□ -1.14
NEDD9-203ENST00000397378 MPIG6BO95866 241 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 IGHV2-70P01814 119 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 ALDOCP09972 364 aaKnown RBP7.92□□□□□ -1.14
NEDD9-203ENST00000397378 ZCCHC18P0CG32 403 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 PPIAL4GP0DN37 164 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 IGHV4-38-2P0DP08 117 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 HTR2AP28223 471 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 LIPAP38571 399 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 CRATP43155 626 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 ETV4P43268 484 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 SLC6A9P48067 706 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 PROK1P58294 105 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 COL10A1Q03692 680 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 NRN1LQ496H8 165 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 TMEM155Q4W5P6 130 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 OXLD1Q5BKU9 147 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 ULK3Q6PHR2 472 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 LRFN4Q6PJG9 635 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 KIRREL3Q8IZU9 778 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 MIER2Q8N344 545 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 OR52E2Q8NGJ4 325 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 OR1J1Q8NGS3 322 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 OR6X1Q8NH79 312 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 LINC01006Q8NI28 216 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 SLC47A1Q96FL8 570 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 MOGAT1Q96PD6 335 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 DIRC2Q96SL1 478 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 SH3GL3Q99963 347 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 CHIAQ9BZP6 476 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 TPT1P8Q9HAU6 139 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 PATZ1Q9HBE1 687 aaKnown RBP7.92□□□□□ -1.14
NEDD9-203ENST00000397378 AIG1Q9NVV5 245 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 CGGBP1Q9UFW8 167 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-203ENST00000397378 RAP2CQ9Y3L5 183 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 NPTNQ9Y639 398 aa7.92□□□□□ -1.14
NEDD9-203ENST00000397378 IQCMA0A1B0GVH7 501 aa7.91□□□□□ -1.14
NEDD9-203ENST00000397378 PLSCR5A0PG75 271 aa7.91□□□□□ -1.14
NEDD9-203ENST00000397378 TLDC2A0PJX2 215 aa7.91□□□□□ -1.14
NEDD9-203ENST00000397378 DHHO43323 396 aa7.91□□□□□ -1.14
NEDD9-203ENST00000397378 SPRY3O43610 288 aa7.91□□□□□ -1.14
NEDD9-203ENST00000397378 MGRN1O60291 552 aa7.91□□□□□ -1.14
NEDD9-203ENST00000397378 PLATP00750 562 aa7.91□□□□□ -1.14
NEDD9-203ENST00000397378 CD55P08174 381 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms