RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SIAEQ9HAT2 523 aa12.08□□□□□ -0.48
SEC13-204ENST00000397099 NOX3Q9HBY0 568 aa12.08□□□□□ -0.48
SEC13-204ENST00000397099 MAN2C1Q9NTJ4 1040 aa12.08□□□□□ -0.48
SEC13-204ENST00000397099 GDF2Q9UK05 429 aaPredicted RBP12.08□□□□□ -0.48
SEC13-204ENST00000397099 FFAR1O14842 300 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 SEC14L2O76054 403 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 H1F0P07305 194 aaKnown RBP12.07□□□□□ -0.48
SEC13-204ENST00000397099 ZNF35P13682 527 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 GLRXP35754 106 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 GIPRP48546 466 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 SELENOVP59797 346 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 MRPS34P82930 218 aaKnown RBP12.07□□□□□ -0.48
SEC13-204ENST00000397099 HGFACQ04756 655 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 PIGFQ07326 219 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 LAPTM4AQ15012 233 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 GKAP1Q5VSY0 366 aaPredicted RBP12.07□□□□□ -0.48
SEC13-204ENST00000397099 SLC16A14Q7RTX9 510 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 SKA3Q8IX90 412 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 ARHGAP24Q8N264 748 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 FAM168AQ92567 244 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 MCUR1Q96AQ8 359 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 ZNF75AQ96N20 296 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 RNF121Q9H920 327 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 ZNF224Q9NZL3 707 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 SLC7A8Q9UHI5 535 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 NAV3Q8IVL0 2385 aa12.07□□□□□ -0.48
SEC13-204ENST00000397099 A0A087WUU8 490 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 IQCMA0A1B0GVH7 501 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 ZNF503-AS2A6NEH8 195 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 TLX2O43763 284 aaPredicted RBP12.06□□□□□ -0.48
SEC13-204ENST00000397099 NDUFS7O75251 213 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 SNAP29O95721 258 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 CELA3BP08861 270 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 THBS4P35443 961 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 YAP1P46937 504 aaKnown RBP12.06□□□□□ -0.48
SEC13-204ENST00000397099 PDLIM4P50479 330 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 CD47Q08722 323 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 SNTB2Q13425 540 aaKnown RBP12.06□□□□□ -0.48
SEC13-204ENST00000397099 ZBED5Q49AG3 693 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 VHLLQ6RSH7 139 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 WDFY1Q8IWB7 410 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 SYT14Q8NB59 555 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 OR4K5Q8NGD3 323 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 MOSPD2Q8NHP6 518 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 SLC7A13Q8TCU3 470 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 NEU4Q8WWR8 484 aaPredicted RBP12.06□□□□□ -0.48
SEC13-204ENST00000397099 PYURFQ96I23 114 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 ZNF347Q96SE7 839 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 MS4A5Q9H3V2 200 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 NDUFAF4Q9P032 175 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 EGFL7Q9UHF1 273 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 GPR160Q9UJ42 338 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 SNX13Q9Y5W8 968 aa12.06□□□□□ -0.48
SEC13-204ENST00000397099 LOC390937A0A1W2PQ73 354 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 J3KTA2 159 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 hCG_2039718K7EN88 272 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 XKRYO14609 159 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 PIP5K1CO60331 668 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 CD14P08571 375 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 NCK1P16333 377 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 MAKP20794 623 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 IFNGR2P38484 337 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 CTXN1P60606 82 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 PCBD1P61457 104 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 MXRA7P84157 204 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 LOXL1Q08397 574 aaPredicted RBP12.05□□□□□ -0.48
SEC13-204ENST00000397099 TBC1D28Q2M2D7 210 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 MTX3Q5HYI7 312 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 SYT9Q86SS6 491 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 MYPOPQ86VE0 399 aaPredicted RBP12.05□□□□□ -0.48
SEC13-204ENST00000397099 ARIH2OSQ8N7S6 290 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 RBM15BQ8NDT2 890 aaKnown RBP12.05□□□□□ -0.48
SEC13-204ENST00000397099 MRPL24Q96A35 216 aaKnown RBP12.05□□□□□ -0.48
SEC13-204ENST00000397099 C7orf34Q96L11 122 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 NSMCE2Q96MF7 247 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 CDRT15Q96T59 188 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 DOK1Q99704 481 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 VRK1Q99986 396 aaPredicted RBP12.05□□□□□ -0.48
SEC13-204ENST00000397099 CCNB1IP1Q9NPC3 277 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 RHCGQ9UBD6 479 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 GRHPRQ9UBQ7 328 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 CD300AQ9UGN4 299 aa12.05□□□□□ -0.48
SEC13-204ENST00000397099 CR1P17927 2039 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 SYNGR3O43761 229 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 FAM107AO95990 144 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 RPL4P36578 427 aaKnown RBP12.04□□□□□ -0.48
SEC13-204ENST00000397099 RAD52P43351 418 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 RUNX1T1Q06455 604 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 RAB39AQ14964 217 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 MOGQ16653 247 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 FGD3Q5JSP0 725 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 FAM27BQ5VT28 67 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 GPR139Q6DWJ6 353 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 KRT80Q6KB66 452 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 SLC25A47Q6Q0C1 308 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 PRIMA1Q86XR5 153 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 ALDH16A1Q8IZ83 802 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 SLC30A7Q8NEW0 376 aa12.04□□□□□ -0.48
SEC13-204ENST00000397099 OR51A7Q8NH64 312 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms