RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SLAMF7Q9NQ25 335 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 LHX9Q9NQ69 397 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 DNAJB12Q9NXW2 375 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 FBXO9Q9UK97 447 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 LOXL2Q9Y4K0 774 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 DSCAMO60469 2012 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 VCANP13611 3396 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 LRP5LA4QPB2 252 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 AIPO00170 330 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CT45A8P0DMV1 189 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CT45A9P0DMV2 189 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 IGLV3-21P80748 117 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CT45A2Q5DJT8 189 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 C12orf73Q69YU5 71 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SLC35F2Q8IXU6 374 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OR4F15Q8NGB8 312 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 VWCEQ96DN2 955 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 DCBLD2Q96PD2 775 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ENAMQ9NRM1 1142 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OSGIN1Q9UJX0 560 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 POLDIP2Q9Y2S7 368 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ARHGAP21Q5T5U3 1957 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TRAV27A0A087WT01 109 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CIB4A0PJX0 185 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 E9PI62 339 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 RPP14O95059 124 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF93P35789 620 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 AP2S1P53680 142 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 RBMS2Q15434 407 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 RAB11BQ15907 218 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM236Q5W0B7 351 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 UBE3DQ7Z6J8 389 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SLC22A18ASQ8N1D0 253 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CENPSQ8N2Z9 138 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OR52I1Q8NGK6 324 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OR13C2Q8NGS9 318 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ZMYND19Q96E35 227 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OXGR1Q96P68 337 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SPIN2AQ99865 258 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SPIN2BQ9BPZ2 258 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 EDEM2Q9BV94 578 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 PLSCR5A0PG75 271 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CDC14CA4D256 554 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 INMT-MINDY4F8WBC2 141 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 DIRAS3O95661 229 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 HIST1H1CP16403 213 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GLP1RP43220 463 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GZMMP51124 257 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 NKAIN4Q8IVV8 208 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 RIMS4Q9H426 269 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 EGLN3Q9H6Z9 239 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 A0A1W2PR77 199 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 PRR19A6NJB7 356 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 C4orf47A7E2U8 309 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF736B4DX44 427 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ATE1O95260 518 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 F13BP05160 661 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 IL9P15248 144 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TNFSF4P23510 183 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 AZGP1P25311 298 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GSK3AP49840 483 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 DLX5P56178 289 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 MESP2Q0VG99 397 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CBX3Q13185 183 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 DNASE1L3Q13609 305 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 NRN1LQ496H8 165 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SLC25A25Q6KCM7 469 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 NIPAL3Q6P499 406 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GHDCQ8N2G8 530 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SPSB1Q96BD6 273 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 Q96M85 177 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 RASL10BQ96S79 203 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GPR27Q9NS67 375 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 P4HTMQ9NXG6 502 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ANKRD61A6NGH8 418 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 HOXD4P09016 255 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 BDKRB2P30411 391 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 AQP2P41181 271 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 RPL19P84098 196 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 MFAP5Q13361 173 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 DYRK1AQ13627 763 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 AADACL4Q5VUY2 407 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 AGAP6Q5VW22 663 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 LIPNQ5VXI9 398 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ZADH2Q8N4Q0 377 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OR51A2Q8NGJ7 313 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OR6Q1Q8NGQ2 317 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OR6X1Q8NH79 312 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 RNASE11Q8TAA1 199 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 RADILQ96JH8 1075 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ATF6BQ99941 703 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ZFP64Q9NPA5 681 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 HELZ2Q9BYK8 2649 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 XRCC2O43543 280 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GTF2F2P13984 249 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ACP1P24666 158 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CDK2P24941 298 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GNG2P59768 71 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 UBE2NLQ5JXB2 153 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms