RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 TACSTD2P09758 323 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 BTCP35070 178 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 SRP9P49458 86 aaKnown RBP12.57□□□□□ -0.4
SNCA-204ENST00000394989 CLDN20P56880 219 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 ALKBH1Q13686 389 aaKnown RBP12.57□□□□□ -0.4
SNCA-204ENST00000394989 GPR176Q14439 515 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 ETFDHQ16134 617 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 SLC36A2Q495M3 483 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 MTFR2Q6P444 385 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 WDFY1Q8IWB7 410 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 KDM8Q8N371 416 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 EID2Q8N6I1 236 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 LGALS14Q8TCE9 139 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 PHYHIPQ92561 330 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 ARL5BQ96KC2 179 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 INTS14Q96SY0 518 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 MARVELD1Q9BSK0 173 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 OCIAD1Q9NX40 245 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 B9D1Q9UPM9 204 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 TRBV11-1A0A0K0K1C0 115 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 PYHIN1Q6K0P9 492 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 ARSKQ6UWY0 536 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 ZNF767PQ75MW2 155 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 FAM220AQ7Z4H9 259 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 COMMD7Q86VX2 200 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 PRSS35Q8N3Z0 413 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 PIGKQ92643 395 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 AKAP1Q92667 903 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNCA-204ENST00000394989 ATOH1Q92858 354 aaPredicted RBP12.57□□□□□ -0.4
SNCA-204ENST00000394989 KLHL15Q96M94 604 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 SPATA2Q9UM82 520 aa12.57□□□□□ -0.4
SNCA-204ENST00000394989 PCDHGA9Q9Y5G4 932 aaKnown RBP12.57□□□□□ -0.4
SNCA-204ENST00000394989 ANKRD61A6NGH8 418 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 XKRYO14609 159 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 SLC22A5O76082 557 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 TRAPPC2P0DI81 140 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 TRAPPC2BP0DI82 140 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 SLC6A1P30531 599 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 ZNF81P51508 661 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 RRAS2P62070 204 aaPredicted RBP12.56□□□□□ -0.4
SNCA-204ENST00000394989 SLC51BQ86UW2 128 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 OR10AC1Q8NH08 325 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 OR5AK2Q8NH90 309 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 OTOSQ8NHW6 89 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 STK35Q8TDR2 534 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 THEM6Q8WUY1 208 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 TXNIPQ9H3M7 391 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 GAREM1Q9H706 876 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 MRPL22Q9NWU5 206 aaKnown RBP12.56□□□□□ -0.4
SNCA-204ENST00000394989 SLCO1C1Q9NYB5 712 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 MED11Q9P086 117 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 IKZF2Q9UKS7 526 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 IGLV1-36A0A0B4J1U3 117 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 IFITM5A6NNB3 132 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 ONECUT2O95948 504 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 CTLA4P16410 223 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 EMP2P54851 167 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 MELKQ14680 651 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 HES5Q5TA89 166 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 FAM199XQ6PEV8 388 aaPredicted RBP12.56□□□□□ -0.4
SNCA-204ENST00000394989 ZNF680Q8NEM1 530 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 OR51A4Q8NGJ6 313 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 RNF138Q8WVD3 245 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 YIPF5Q969M3 257 aa12.56□□□□□ -0.4
SNCA-204ENST00000394989 VSX1Q9NZR4 365 aaPredicted RBP12.56□□□□□ -0.4
SNCA-204ENST00000394989 ANKUB1A6NFN9 424 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 OR4C45A6NMZ5 311 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 IGHMP01871 453 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 AP2S1P53680 142 aaPredicted RBP12.55□□□□□ -0.4
SNCA-204ENST00000394989 EGR3Q06889 387 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 ZBTB37Q5TC79 503 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 CREB3L2Q70SY1 520 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 SLC35D2Q76EJ3 337 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 MISPQ8IVT2 679 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 TCTE3Q8IZS6 198 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 ZBTB44Q8NCP5 570 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 OR2G2Q8NGZ5 317 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 ST8SIA2Q92186 375 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 VDAC3Q9Y277 283 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 FKBP7Q9Y680 259 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 TRBV5-5A0A0J9YX44 114 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 PATE3B3GLJ2 98 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 AIPO00170 330 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 UBL3O95164 117 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 ICAM2P13598 275 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 ADRA2CP18825 462 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 DGCR2P98153 550 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 C17orf67Q0P5P2 114 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 Q499Y3 187 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 CPEB2Q7Z5Q1 589 aaKnown RBP12.55□□□□□ -0.4
SNCA-204ENST00000394989 WDR5BQ86VZ2 330 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 PPP1R3BQ86XI6 285 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 IER2Q9BTL4 223 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 MS4A7Q9GZW8 240 aaPredicted RBP12.55□□□□□ -0.4
SNCA-204ENST00000394989 ABCG5Q9H222 651 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 MRPL39Q9NYK5 338 aaKnown RBP12.55□□□□□ -0.4
SNCA-204ENST00000394989 NKIRAS2Q9NYR9 191 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 MRPS7Q9Y2R9 242 aaKnown RBP12.55□□□□□ -0.4
SNCA-204ENST00000394989 SLC22A23A1A5C7 686 aa12.55□□□□□ -0.4
SNCA-204ENST00000394989 SHISA8B8ZZ34 492 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms