RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 MT-ND5P03915 603 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 PPIBP23284 216 aaKnown RBP17.95■□□□□ 0.46
TRAF4-203ENST00000394925 FPR2P25090 351 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 LCN2P80188 198 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 PLP2Q04941 152 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 MOGQ16653 247 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 PRR31Q5SQ13 230 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 LINC00114Q6XXX2 140 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 DPPA2Q7Z7J5 298 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 SMYD1Q8NB12 490 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 RBM15BQ8NDT2 890 aaKnown RBP17.95■□□□□ 0.46
TRAF4-203ENST00000394925 GAL3ST1Q99999 423 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 VAPAQ9P0L0 249 aa17.95■□□□□ 0.46
TRAF4-203ENST00000394925 PGA4P0DJD7 388 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 PGA3P0DJD8 388 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 MAKP20794 623 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 GATA3P23771 443 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 ZNF81P51508 661 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 STX1BP61266 288 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 FOXL1Q12952 345 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 ZNF74Q16587 644 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 PAGE3Q5JUK9 113 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 ZNF613Q6PF04 617 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 RETREG3Q86VR2 466 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 LRRC17Q8N6Y2 441 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 OR1J1Q8NGS3 322 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 CCL17Q92583 94 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 TRIM44Q96DX7 344 aaPredicted RBP17.94■□□□□ 0.46
TRAF4-203ENST00000394925 ELMOD3Q96FG2 381 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 IKZF5Q9H5V7 419 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 TMEM38AQ9H6F2 299 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 EVA1AQ9H8M9 152 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 NTN4Q9HB63 628 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 NANSQ9NR45 359 aa17.94■□□□□ 0.46
TRAF4-203ENST00000394925 ISPDA4D126 451 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 CPSF4LA6NMK7 179 aaKnown RBP17.93■□□□□ 0.46
TRAF4-203ENST00000394925 SPRY3O43610 288 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 CHP2O43745 196 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 MFN2O95140 757 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 FSHBP01225 129 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 IGHV3-13P01766 116 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 HKR1P10072 659 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 CCNOP22674 350 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 APLNRP35414 380 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 CLRN1P58418 232 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 SHISA2Q6UWI4 295 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 TREML1Q86YW5 311 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 FUNDC1Q8IVP5 155 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 LRRC18Q8N456 261 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 ZNF696Q9H7X3 374 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 UBAP1Q9NZ09 502 aa17.93■□□□□ 0.46
TRAF4-203ENST00000394925 KPNA4O00629 521 aaPredicted RBP17.92■□□□□ 0.46
TRAF4-203ENST00000394925 FMO6PO60774 539 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 HIST1H2ABP04908 130 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 HSF2Q03933 536 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 ENTPD8Q5MY95 495 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 TTC33Q6PID6 262 aaPredicted RBP17.92■□□□□ 0.46
TRAF4-203ENST00000394925 BLOC1S3Q6QNY0 202 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 RBMS3Q6XE24 437 aaKnown RBP17.92■□□□□ 0.46
TRAF4-203ENST00000394925 HIST3H2AQ7L7L0 130 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 SIGLECL1Q8N7X8 197 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 HIPK4Q8NE63 616 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 DVL3Q92997 716 aaPredicted RBP17.92■□□□□ 0.46
TRAF4-203ENST00000394925 HIST1H2ACQ93077 130 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 MCHR2Q969V1 340 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 SPDL1Q96EA4 605 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 ZNF347Q96SE7 839 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.92■□□□□ 0.46
TRAF4-203ENST00000394925 TRIM33Q9UPN9 1127 aa17.92■□□□□ 0.46
TRAF4-203ENST00000394925 EVPLLA8MZ36 301 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 IGHV1-46P01743 117 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 IGHG1P01857 330 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 MMP7P09237 267 aaPredicted RBP17.91■□□□□ 0.46
TRAF4-203ENST00000394925 UMPSP11172 480 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 GPX2P18283 190 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 ZNF84P51523 738 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 NPTX1Q15818 432 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 DUSP7Q16829 419 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 FAM209AQ5JX71 171 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 SPATA46Q5T0L3 261 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 EPGNQ6UW88 154 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 SYT14Q8NB59 555 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 CPEB3Q8NE35 698 aaKnown RBP17.91■□□□□ 0.46
TRAF4-203ENST00000394925 OR6T1Q8NGN1 323 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 ST7LQ8TDW4 575 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 DUX5Q96PT3 197 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 ARHGDIGQ99819 225 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 C1QTNF5Q9BXJ0 243 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 PARD6BQ9BYG5 372 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 SLCO1B3Q9NPD5 702 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 CCDC167Q9P0B6 97 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 CORO2BQ9UQ03 480 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 ANGPT4Q9Y264 503 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 USH1CQ9Y6N9 552 aa17.91■□□□□ 0.46
TRAF4-203ENST00000394925 TRBV5-3A0A0A0MS03 114 aa17.9■□□□□ 0.46
TRAF4-203ENST00000394925 LYPD3O95274 346 aa17.9■□□□□ 0.46
TRAF4-203ENST00000394925 OPN1SWP03999 348 aa17.9■□□□□ 0.46
TRAF4-203ENST00000394925 THY1P04216 161 aa17.9■□□□□ 0.46
TRAF4-203ENST00000394925 GCH1P30793 250 aa17.9■□□□□ 0.46
TRAF4-203ENST00000394925 MPV17P39210 176 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms