RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 HHLA2Q9UM44 414 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 FOXJ3Q9UPW0 622 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 MOKQ9UQ07 419 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 FNDC1Q4ZHG4 1894 aaPredicted RBP14.68□□□□□ -0.06
PCDH1-203ENST00000394536 KIR2DS5A0A0G2JLQ3 304 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 A0A0G2JNG1 304 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 KIR2DS3K7RE56 304 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 NGFRP08138 427 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 IL9P15248 144 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 TAS2R19P59542 299 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 MC2RQ01718 297 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 KIR2DS5Q14953 304 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 GTPBP8Q8N3Z3 284 aaPredicted RBP14.68□□□□□ -0.06
PCDH1-203ENST00000394536 C3orf49Q96BT1 292 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 MRGPRX1Q96LB2 322 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 CXorf58Q96LI9 332 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 FBXO4Q9UKT5 387 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 AHCTF1Q8WYP5 2266 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 ZNF878C9JN71 531 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 OGG1O15527 345 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 MPIG6BO95866 241 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 SDHAP31040 664 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 RABIFP47224 123 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 ZNF658BQ4V348 819 aaPredicted RBP14.68□□□□□ -0.06
PCDH1-203ENST00000394536 DNM1P34Q6PK57 102 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 CORO6Q6QEF8 472 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 COX15Q7KZN9 410 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 NPEPL1Q8NDH3 523 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 KISS1RQ969F8 398 aaPredicted RBP14.68□□□□□ -0.06
PCDH1-203ENST00000394536 LPAR4Q99677 370 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 ASXL3Q9C0F0 2248 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 GBF1Q92538 1859 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 MPC2O95563 127 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 THBS2P35442 1172 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 CDONQ4KMG0 1287 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 TRILQ7L0X0 811 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 ZNF595Q8IYB9 648 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 OR11G2Q8NGC1 345 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 GPR137Q96N19 417 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 SPACA5Q96QH8 159 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 NTMQ9P121 344 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 WDR87Q6ZQQ6 2873 aa14.68□□□□□ -0.06
PCDH1-203ENST00000394536 SDK2Q58EX2 2172 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 GGT3PA6NGU5 568 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 PTP4A3O75365 173 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 CALCBP10092 127 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 M6PRP20645 277 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 EIF2B5Q13144 721 aaKnown RBP14.67□□□□□ -0.06
PCDH1-203ENST00000394536 OR7A5Q15622 319 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 SWI5Q1ZZU3 235 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 MUC20Q8N307 709 aaPredicted RBP14.67□□□□□ -0.06
PCDH1-203ENST00000394536 SCARB1Q8WTV0 552 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 FAM71F1Q96KD3 344 aaPredicted RBP14.67□□□□□ -0.06
PCDH1-203ENST00000394536 BMFQ96LC9 184 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 LINC00052Q96N35 136 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 SOSTQ9BQB4 213 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 POLE3Q9NRF9 147 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 OR5K3A6NET4 321 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 KRBOX1C9JBD0 128 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 FARS2O95363 451 aaKnown RBP14.67□□□□□ -0.06
PCDH1-203ENST00000394536 SCGB1D2O95969 90 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 CTHP32929 405 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 SERTAD2Q14140 314 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 NKAIN2Q5VXU1 208 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 B3GNTL1Q67FW5 361 aaPredicted RBP14.67□□□□□ -0.06
PCDH1-203ENST00000394536 C3orf33Q6P1S2 294 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 PAQR8Q8TEZ7 354 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 JSRP1Q96MG2 331 aaPredicted RBP14.67□□□□□ -0.06
PCDH1-203ENST00000394536 ZNF587Q96SQ5 575 aaPredicted RBP14.67□□□□□ -0.06
PCDH1-203ENST00000394536 SELENOIQ9C0D9 397 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 TAS2R4Q9NYW5 299 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 TANC1Q9C0D5 1861 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 TRAV8-7A0A075B6U6 113 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 SYT7O43581 403 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 AKR7A3O95154 331 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 COL9A1P20849 921 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 C1QL3Q5VWW1 255 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 AWAT2Q6E213 333 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 ZNF485Q8NCK3 441 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 OR13C9Q8NGT0 318 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 GPN3Q9UHW5 284 aaPredicted RBP14.67□□□□□ -0.06
PCDH1-203ENST00000394536 PCDHGA5Q9Y5G8 931 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 ETV7Q9Y603 341 aa14.67□□□□□ -0.06
PCDH1-203ENST00000394536 P2RY10O00398 339 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 SIGLEC5O15389 551 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 HCRTR1O43613 425 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 TGM6O95932 706 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 CTSBP07858 339 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 CEBPGP53567 150 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 SIGLEC14Q08ET2 396 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 TSTD1Q8NFU3 115 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 OR4S1Q8NGB4 309 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 DCUN1D4Q92564 292 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 THRSPQ92748 146 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 DAZLQ92904 295 aaKnown RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 TSLPQ969D9 159 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 CHMP1AQ9HD42 196 aaPredicted RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 CHRNA9Q9UGM1 479 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 COA3Q9Y2R0 106 aaPredicted RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 PLXND1Q9Y4D7 1925 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms