RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 EPHA8P29322 1005 aaPredicted RBP10.12□□□□□ -0.79
CUX1-204ENST00000393824 PTGFRP43088 359 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 CSNK1G2P78368 415 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 PRDX1Q06830 199 aaKnown RBP10.12□□□□□ -0.79
CUX1-204ENST00000393824 SNTB1Q13884 538 aaKnown RBP10.12□□□□□ -0.79
CUX1-204ENST00000393824 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.12□□□□□ -0.79
CUX1-204ENST00000393824 GKN2Q86XP6 184 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 VRK2Q86Y07 508 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 RNF113BQ8IZP6 322 aaKnown RBP10.12□□□□□ -0.79
CUX1-204ENST00000393824 SYS1Q8N2H4 156 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 OR52L1Q8NGH7 329 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 OR1S2Q8NGQ3 325 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 RXFP4Q8TDU9 374 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 OR14A2Q96R54 314 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 CRB3Q9BUF7 120 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 AICDAQ9GZX7 198 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 HEBP2Q9Y5Z4 205 aa10.12□□□□□ -0.79
CUX1-204ENST00000393824 ASCC3Q8N3C0 2202 aaKnown RBP10.12□□□□□ -0.79
CUX1-204ENST00000393824 LY6G6EA0A0G2JKS1 128 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 UNC119BA6NIH7 251 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 BCL2L11O43521 198 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 GALR2O43603 387 aaPredicted RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 IGHV2-70P01814 119 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 MRPL3P09001 348 aaKnown RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 RNF224P0DH78 156 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 CALCBP10092 127 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 BMP7P18075 431 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 HTR2AP28223 471 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 FASLGP48023 281 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 NUBP1P53384 320 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SIRPAP78324 504 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 ECH1Q13011 328 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 LASP1Q14847 261 aaKnown RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 SLC9A5Q14940 896 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 ZIC1Q15915 447 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 LIN54Q6MZP7 749 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SSX6Q7RTT6 188 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SLC16A13Q7RTY0 426 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SYNPRQ8TBG9 265 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 ZG16BQ96DA0 208 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 OR7D2Q96RA2 312 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 MCHR1Q99705 422 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 ADAT1Q9BUB4 502 aaKnown RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 RNF122Q9H9V4 155 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SEBOXQ9HB31 216 aaPredicted RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 HRASLS2Q9NWW9 162 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 U3KQA8 63 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 C5orf52A6NGY3 159 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 ARGFXA6NJG6 315 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 H7C417 338 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 IMPA2O14732 288 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 PIN1P1O15428 100 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 CTSVO60911 334 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SLC25A12O75746 678 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 AGR2O95994 175 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 HPGDP15428 266 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 CDK2P24941 298 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 BDKRB2P30411 391 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 MPLP40238 635 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SSR2P43308 183 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 LUMP51884 338 aaPredicted RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 PRKAG1P54619 331 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 PSMD4P55036 377 aaKnown RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 RGS8P57771 180 aaPredicted RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 UBE2MP61081 183 aaKnown RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 FOXK2Q01167 660 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 CFHR1Q03591 330 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SRSF4Q08170 494 aaKnown RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 POU4F2Q12837 409 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 NDUFAF6Q330K2 333 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 RPL22L1Q6P5R6 122 aaKnown RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 C11orf88Q6PI97 169 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 OGFOD3Q6PK18 319 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 ZNF813Q6ZN06 617 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 STK35Q8TDR2 534 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 EDARADDQ8WWZ3 215 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 GTF3AQ92664 365 aaKnown RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 MIB2Q96AX9 1013 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 PELI1Q96FA3 418 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 TMEM68Q96MH6 324 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 HS6ST2Q96MM7 605 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 CD180Q99467 661 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 OR51V1Q9H2C8 321 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SLC22A11Q9NSA0 550 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SIDT1Q9NXL6 827 aaKnown RBP10.11□□□□□ -0.79
CUX1-204ENST00000393824 TAS2R8Q9NYW2 309 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 MTFP1Q9UDX5 166 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 MIOXQ9UGB7 285 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 TNFSF18Q9UNG2 199 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 MOKQ9UQ07 419 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 SLC35A3Q9Y2D2 325 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 GVINP1Q7Z2Y8 2422 aa10.11□□□□□ -0.79
CUX1-204ENST00000393824 OR14I1A6ND48 311 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 DUXAA6NLW8 204 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 NUDT19A8MXV4 375 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 C4orf51C9J302 202 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 UBE2CO00762 179 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 FGF16O43320 207 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 OR1F1O43749 312 aa10.1□□□□□ -0.79
CUX1-204ENST00000393824 CTNSO60931 367 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms