RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 ZNF426Q9BUY5 554 aa16.31■□□□□ 0.2
SNCB-202ENST00000393693 PRRG3Q9BZD7 231 aa16.31■□□□□ 0.2
SNCB-202ENST00000393693 SERINC1Q9NRX5 453 aa16.31■□□□□ 0.2
SNCB-202ENST00000393693 IMPAD1Q9NX62 359 aa16.31■□□□□ 0.2
SNCB-202ENST00000393693 SLC25A15Q9Y619 301 aa16.31■□□□□ 0.2
SNCB-202ENST00000393693 IGKV3D-15A0A087WSY6 115 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 UNC119BA6NIH7 251 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 ZNF716A6NP11 495 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 E9PQ18 207 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 M0R1B8 84 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 PIP5K1CO60331 668 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 MPZL2O60487 215 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 FAM157CP0CG43 387 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 TFPIP10646 304 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 CXCR1P25024 350 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 CD40P25942 277 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 FABP6P51161 128 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 PTGES3Q15185 160 aaKnown RBP16.3■□□□□ 0.2
SNCB-202ENST00000393693 RAB35Q15286 201 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 RBM48Q5RL73 367 aaKnown RBP16.3■□□□□ 0.2
SNCB-202ENST00000393693 TMEM108Q6UXF1 575 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 WDR88Q6ZMY6 472 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 TMPRSS11FQ6ZWK6 438 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 MUC15Q8N387 334 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 CLDN22Q8N7P3 220 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 BPIFA2Q96DR5 249 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 RADILQ96JH8 1075 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 ARL5BQ96KC2 179 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 TMEM43Q9BTV4 400 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 ADAM19Q9H013 955 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 ZNF696Q9H7X3 374 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 BLOC1S6Q9UL45 172 aa16.3■□□□□ 0.2
SNCB-202ENST00000393693 NOSIPQ9Y314 301 aaKnown RBP16.3■□□□□ 0.2
SNCB-202ENST00000393693 ZAR1LA6NP61 321 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 EFCAB9A8MZ26 197 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 IGF2P01344 180 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 PTAFRP25105 342 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 GPR4P46093 362 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 POLR2HP52434 150 aaKnown RBP16.29■□□□□ 0.2
SNCB-202ENST00000393693 ISL1P61371 349 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 CSNK2A1P68400 391 aaPredicted RBP16.29■□□□□ 0.2
SNCB-202ENST00000393693 MYBPC1Q00872 1141 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 LOXL1Q08397 574 aaPredicted RBP16.29■□□□□ 0.2
SNCB-202ENST00000393693 SLX4IPQ5VYV7 408 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 CASP12Q6UXS9 341 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 SSX8Q7RTT4 187 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 GRINAQ7Z429 371 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 CCDC103Q8IW40 242 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 FBXL14Q8N1E6 418 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 FAM81AQ8TBF8 368 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 HDAC2Q92769 488 aaKnown RBP16.29■□□□□ 0.2
SNCB-202ENST00000393693 APH1AQ96BI3 265 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 SGTBQ96EQ0 304 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 KCNK17Q96T54 332 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 EMC3Q9P0I2 261 aa16.29■□□□□ 0.2
SNCB-202ENST00000393693 KPNA4O00629 521 aaPredicted RBP16.28■□□□□ 0.2
SNCB-202ENST00000393693 SOX14O95416 240 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 TACR3P29371 465 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 DSCR9P59020 149 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 CSNK2BP67870 215 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 TEKQ02763 1124 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 CD47Q08722 323 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 GABRA6Q16445 453 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 KCTD21Q4G0X4 260 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 C9orf135Q5VTT2 229 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 ARIH2OSQ8N7S6 290 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 PFN4Q8NHR9 129 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 OR11A1Q9GZK7 315 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 TBC1D23Q9NUY8 699 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 ASB6Q9NWX5 421 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 CDC42EP3Q9UKI2 254 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 CDH10Q9Y6N8 788 aa16.28■□□□□ 0.2
SNCB-202ENST00000393693 LY6HO94772 140 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 ITGA5P08648 1049 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 SAGP10523 405 aaPredicted RBP16.27■□□□□ 0.2
SNCB-202ENST00000393693 CCNA2P20248 432 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 EPHA2P29317 976 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 SLC9A3P48764 834 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 CXCR4P61073 352 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 LSM11P83369 360 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNCB-202ENST00000393693 C6orf141Q5SZD1 244 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 TMEM154Q6P9G4 183 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 C5orf46Q6UWT4 87 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 WDR31Q8NA23 367 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 OR52L1Q8NGH7 329 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 FBLIM1Q8WUP2 373 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 SLC25A43Q8WUT9 341 aaPredicted RBP16.27■□□□□ 0.2
SNCB-202ENST00000393693 TRUB1Q8WWH5 349 aaKnown RBP16.27■□□□□ 0.2
SNCB-202ENST00000393693 FAM168AQ92567 244 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 GPA33Q99795 319 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 BEX2Q9BXY8 128 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 SLC25A19Q9HC21 320 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 MEPEQ9NQ76 525 aaPredicted RBP16.27■□□□□ 0.2
SNCB-202ENST00000393693 SCN3BQ9NY72 215 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 TAS2R16Q9NYV7 291 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 PCDHGB5Q9Y5G0 923 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 ATP23Q9Y6H3 246 aa16.27■□□□□ 0.2
SNCB-202ENST00000393693 MRPL33O75394 65 aaKnown RBP16.26■□□□□ 0.19
SNCB-202ENST00000393693 IGHV4-31P0DP07 118 aa16.26■□□□□ 0.19
SNCB-202ENST00000393693 SLC25A16P16260 332 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms