RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ZNF75AQ96N20 296 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 RBP7Q96R05 134 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 B9D1Q9UPM9 204 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 AMDHD2Q9Y303 409 aa11.66□□□□□ -0.54
USP44-202ENST00000393091 MED12Q93074 2177 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 CCDC182A6NF36 153 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 RIIAD1A6NNX1 92 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 KHDRBS3O75525 346 aaKnown RBP11.65□□□□□ -0.54
USP44-202ENST00000393091 SOX14O95416 240 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 CST2P09228 141 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 EPHA2P29317 976 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 MELKQ14680 651 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 STAC2Q6ZMT1 411 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 IPCEF1Q8WWN9 437 aaPredicted RBP11.65□□□□□ -0.54
USP44-202ENST00000393091 ANKRD60Q9BZ19 345 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 OPN3Q9H1Y3 402 aaPredicted RBP11.65□□□□□ -0.54
USP44-202ENST00000393091 SLC17A5Q9NRA2 495 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 ZNF226Q9NYT6 803 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 FAM208BQ5VWN6 2430 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 RAI1Q7Z5J4 1906 aaPredicted RBP11.65□□□□□ -0.54
USP44-202ENST00000393091 SMG1Q96Q15 3661 aaKnown RBP11.65□□□□□ -0.54
USP44-202ENST00000393091 TIMM23BQ5SRD1 257 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 IGFN1Q86VF2 1251 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 JAZF1Q86VZ6 243 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 LSRQ86X29 649 aaPredicted RBP11.65□□□□□ -0.54
USP44-202ENST00000393091 GID4Q8IVV7 300 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 OR2T4Q8NH00 348 aa11.65□□□□□ -0.54
USP44-202ENST00000393091 SH3D21A4FU49 640 aa11.65□□□□□ -0.55
USP44-202ENST00000393091 H3BN98 237 aa11.65□□□□□ -0.55
USP44-202ENST00000393091 QDPRP09417 244 aa11.65□□□□□ -0.55
USP44-202ENST00000393091 CDC42P60953 191 aa11.65□□□□□ -0.55
USP44-202ENST00000393091 ROR2Q01974 943 aaKnown RBP11.65□□□□□ -0.55
USP44-202ENST00000393091 C3P1Q6ZMU1 363 aa11.65□□□□□ -0.55
USP44-202ENST00000393091 KISS1RQ969F8 398 aaPredicted RBP11.65□□□□□ -0.55
USP44-202ENST00000393091 MNTQ99583 582 aa11.65□□□□□ -0.55
USP44-202ENST00000393091 SIAEQ9HAT2 523 aa11.65□□□□□ -0.55
USP44-202ENST00000393091 PLCXD1Q9NUJ7 323 aa11.65□□□□□ -0.55
USP44-202ENST00000393091 CLEC4AQ9UMR7 237 aa11.65□□□□□ -0.55
USP44-202ENST00000393091 J3QRE1 110 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 DENRO43583 198 aaKnown RBP11.64□□□□□ -0.55
USP44-202ENST00000393091 MYF6P23409 242 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 CCKARP32238 428 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 GLB1L2Q8IW92 636 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 OR6V1Q8N148 313 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 SLC26A10Q8NG04 563 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 HSD17B8Q92506 261 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 DNAJA3Q96EY1 480 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 ADI1Q9BV57 179 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 RBM24Q9BX46 236 aaKnown RBP11.64□□□□□ -0.55
USP44-202ENST00000393091 KCNJ16Q9NPI9 418 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 GALNT8Q9NY28 637 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 PRKYO43930 277 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 GLCEO94923 617 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 COX5BP10606 129 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 LAP3P28838 519 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 ZNF84P51523 738 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 ISL1P61371 349 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 TGFBR3Q03167 851 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 CAMK2DQ13557 499 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 CDSNQ15517 529 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 NCCRP1Q6ZVX7 275 aaPredicted RBP11.64□□□□□ -0.55
USP44-202ENST00000393091 DHRSXQ8N5I4 330 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 CNEP1R1Q8N9A8 125 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 WDR31Q8NA23 367 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 SETD9Q8NE22 299 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 ZNF555Q8NEP9 628 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 OR52E2Q8NGJ4 325 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 EMC6Q9BV81 110 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 ULBP2Q9BZM5 246 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 ZNF224Q9NZL3 707 aa11.64□□□□□ -0.55
USP44-202ENST00000393091 WARS2Q9UGM6 360 aaKnown RBP11.64□□□□□ -0.55
USP44-202ENST00000393091 RALYQ9UKM9 306 aaKnown RBP11.64□□□□□ -0.55
USP44-202ENST00000393091 INTS1Q8N201 2190 aaKnown RBP11.64□□□□□ -0.55
USP44-202ENST00000393091 IGKV1D-43A0A0B4J1Z2 117 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 IGLV1-44P01699 117 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 SPI1P17947 270 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 PAICSP22234 425 aaKnown RBP11.63□□□□□ -0.55
USP44-202ENST00000393091 CXCR4P61073 352 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 SNCBQ16143 134 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 LEG1Q6P5S2 330 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 BHLHA15Q7RTS1 189 aaPredicted RBP11.63□□□□□ -0.55
USP44-202ENST00000393091 ENTHD1Q8IYW4 607 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 NMNAT3Q96T66 252 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 APOL4Q9BPW4 351 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 CRLF2Q9HC73 371 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 POLE4Q9NR33 117 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 ARHGEF9O43307 516 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 CTLA4P16410 223 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 SLC15A1P46059 708 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 CRMP1Q14194 572 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 CXorf67Q86X51 503 aaPredicted RBP11.63□□□□□ -0.55
USP44-202ENST00000393091 FOXB1Q99853 325 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 HINT3Q9NQE9 182 aaKnown RBP11.63□□□□□ -0.55
USP44-202ENST00000393091 UPB1Q9UBR1 384 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 EXOGQ9Y2C4 368 aaKnown RBP11.63□□□□□ -0.55
USP44-202ENST00000393091 FAM221AA4D161 298 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 MMP7P09237 267 aaPredicted RBP11.63□□□□□ -0.55
USP44-202ENST00000393091 HTR1FP30939 366 aa11.63□□□□□ -0.55
USP44-202ENST00000393091 POLR2IP36954 125 aaKnown RBP11.63□□□□□ -0.55
USP44-202ENST00000393091 CSNK2BP67870 215 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms