RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 VN1R1Q9GZP7 353 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 NCOR1P1Q9H4R4 102 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 C19orf12Q9NSK7 152 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 ACER3Q9NUN7 267 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 CLEC2DQ9UHP7 191 aa17.24■□□□□ 0.35
CCDC50-202ENST00000392456 ACP1P24666 158 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 SPIBQ01892 262 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 SPEM2Q0P670 501 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 MLLT11Q13015 90 aaPredicted RBP17.23■□□□□ 0.35
CCDC50-202ENST00000392456 ZNF311Q5JNZ3 666 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 SAPCD1Q5SSQ6 148 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 DCST2Q5T1A1 773 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 CMIPQ8IY22 773 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 COX18Q8N8Q8 333 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 POC1BQ8TC44 478 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 GATAD2BQ8WXI9 593 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 TM9SF4Q92544 642 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 LCORQ96JN0 433 aaPredicted RBP17.23■□□□□ 0.35
CCDC50-202ENST00000392456 TGIF2Q9GZN2 237 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 CTPS2Q9NRF8 586 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 WDR45Q9Y484 360 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 PEX12O00623 359 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 PIPP12273 146 aaPredicted RBP17.23■□□□□ 0.35
CCDC50-202ENST00000392456 ZNF28P17035 718 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 AHCYP23526 432 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 PPT1P50897 306 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 FUT7Q11130 342 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 CLN3Q13286 438 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 NSDHLQ15738 373 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 PYY3Q5JQD4 70 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 C10orf91Q5T1B1 145 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 DEF8Q6ZN54 512 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 LANCL3Q6ZV70 420 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 PPP1R3BQ86XI6 285 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 SLC5A8Q8N695 610 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 ZNF615Q8N8J6 731 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 SYT14Q8NB59 555 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 ARSGQ96EG1 525 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 OR10A5Q9H207 317 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 UNKLQ9H9P5 680 aaKnown RBP17.23■□□□□ 0.35
CCDC50-202ENST00000392456 MUC6Q6W4X9 2439 aa17.23■□□□□ 0.35
CCDC50-202ENST00000392456 ZFHX2Q9C0A1 2572 aaPredicted RBP17.23■□□□□ 0.35
CCDC50-202ENST00000392456 TNFRSF11BO00300 401 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 FLRT2O43155 660 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 IGKV1D-16P01601 117 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 ABCD3P28288 659 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 DDTP30046 118 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 NPBWR1P48145 328 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 PIN1Q13526 163 aaPredicted RBP17.22■□□□□ 0.35
CCDC50-202ENST00000392456 NKAIN1Q4KMZ8 207 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 FAM69BQ5VUD6 431 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 QSOX2Q6ZRP7 698 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 OR4C15Q8NGM1 316 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 HOXB13Q92826 284 aaPredicted RBP17.22■□□□□ 0.35
CCDC50-202ENST00000392456 POLR2J2Q9GZM3 115 aaKnown RBP17.22■□□□□ 0.35
CCDC50-202ENST00000392456 ZNF350Q9GZX5 532 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 GFOD1Q9NXC2 390 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 CARHSP1Q9Y2V2 147 aaKnown RBP17.22■□□□□ 0.35
CCDC50-202ENST00000392456 NKX2-2O95096 273 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 PAX6P26367 422 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 MELKQ14680 651 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 PEA15Q15121 130 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 PRAMEF8Q5VWM4 474 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 PRAMEF7Q5VXH5 474 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 CDPF1Q6NVV7 123 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 ZCCHC12Q6PEW1 402 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 MED25Q71SY5 747 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 STT3BQ8TCJ2 826 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 LMF1Q96S06 567 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 SRPK3Q9UPE1 567 aa17.22■□□□□ 0.35
CCDC50-202ENST00000392456 ZNF593O00488 134 aaPredicted RBP17.21■□□□□ 0.35
CCDC50-202ENST00000392456 CT45A8P0DMV1 189 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 CT45A9P0DMV2 189 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 AGAP20933 346 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 SEC61A1P61619 476 aaKnown RBP17.21■□□□□ 0.35
CCDC50-202ENST00000392456 CT45A2Q5DJT8 189 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 YOD1Q5VVQ6 348 aaPredicted RBP17.21■□□□□ 0.35
CCDC50-202ENST00000392456 ZNF385CQ66K41 422 aaPredicted RBP17.21■□□□□ 0.35
CCDC50-202ENST00000392456 ETV3LQ6ZN32 361 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 SLC29A4Q7RTT9 530 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 ZSCAN1Q8NBB4 408 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 STACQ99469 402 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 OR8D2Q9GZM6 311 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 TOLLIPQ9H0E2 274 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 ARL6Q9H0F7 186 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 MMACHCQ9Y4U1 282 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 PCNX2A6NKB5 2137 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 ASPMQ8IZT6 3477 aa17.21■□□□□ 0.35
CCDC50-202ENST00000392456 IGHV3-20A0A0C4DH32 117 aa17.21■□□□□ 0.34
CCDC50-202ENST00000392456 KHDRBS3O75525 346 aaKnown RBP17.21■□□□□ 0.34
CCDC50-202ENST00000392456 IGF2P01344 180 aa17.21■□□□□ 0.34
CCDC50-202ENST00000392456 GIFP27352 417 aa17.21■□□□□ 0.34
CCDC50-202ENST00000392456 CCR6P51684 374 aa17.21■□□□□ 0.34
CCDC50-202ENST00000392456 LSM11P83369 360 aaKnown RBP eCLIP17.21■□□□□ 0.34
CCDC50-202ENST00000392456 C16orf54Q6UWD8 224 aa17.21■□□□□ 0.34
CCDC50-202ENST00000392456 OR10G2Q8NGC3 310 aa17.21■□□□□ 0.34
CCDC50-202ENST00000392456 SLC39A7Q92504 469 aa17.21■□□□□ 0.34
CCDC50-202ENST00000392456 PIGMQ9H3S5 423 aa17.21■□□□□ 0.34
CCDC50-202ENST00000392456 MTHFD2LQ9H903 347 aaPredicted RBP17.21■□□□□ 0.34
CCDC50-202ENST00000392456 NMNAT1Q9HAN9 279 aaPredicted RBP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms