RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 RFX3P48380 749 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 KLRC3Q07444 240 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 SCRN3Q0VDG4 424 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 C1orf220Q5T0J3 134 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 Q6ZSA8 131 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TMEM179Q6ZVK1 233 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ATP6V0BQ99437 205 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 EDEM2Q9BV94 578 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ACAT2Q9BWD1 397 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TRIM45Q9H8W5 580 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 FN3KRPQ9HA64 309 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TERF2IPQ9NYB0 399 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 EPS15L1Q9UBC2 864 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 MRPS18BQ9Y676 258 aaKnown RBP0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 R4GN34 69 aa0.32□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TRAV6A0A075B6T7 132 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TRAV39A0A0B4J263 110 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 OR6C70A6NIJ9 312 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 OR1F1O43749 312 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 BCAS2O75934 225 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 AP2A1O95782 977 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 LHBP01229 141 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 CT62P0C5K7 136 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 CCDC192P0DO97 292 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 IMPDH1P20839 514 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ZNF138P52744 262 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 KRTAP10-4P60372 401 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ASCL5Q7RTU5 278 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 SLC35F2Q8IXU6 374 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ZNF101Q8IZC7 436 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 N4BP2L2Q92802 583 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 SAMD8Q96LT4 415 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 SH3GL3Q99963 347 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 DPH5Q9H2P9 285 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 NLE1Q9NVX2 485 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 SPASTQ9UBP0 616 aa0.31□□□□□ -2.36
RNU6-1009P-201ENST00000390996 RGS16O15492 202 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 KERAO60938 352 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 UTS2O95399 124 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 PFN1P07737 140 aaKnown RBP0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 OR8U9P0C7N5 309 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 DRD5P21918 477 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 HRH1P35367 487 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 CEACAM6P40199 344 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ACADVLP49748 655 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 IRX3P78415 501 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 CBX3Q13185 183 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 C1orf61Q13536 156 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 OR5I1Q13606 314 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 RNASE13Q5GAN3 156 aaKnown RBP0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TTC19Q6DKK2 380 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 LHFPL3Q86UP9 236 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 CCDC65Q8IXS2 484 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 KDM8Q8N371 416 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 OR52H1Q8NGJ2 320 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 OR1F12Q8NHA8 337 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 EFHD2Q96C19 240 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 C7orf34Q96L11 122 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TUBGCP2Q9BSJ2 902 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 FICDQ9BVA6 458 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 MCCC2Q9HCC0 563 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ARGLU1Q9NWB6 273 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TMCO1Q9UM00 188 aa0.3□□□□□ -2.36
RNU6-1009P-201ENST00000390996 IGLV10-54A0A075B6I4 117 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 A8MXQ7 604 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 RAB3DO95716 219 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TGFAP01135 160 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 CAPN1P07384 714 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ZNF688P0C7X2 276 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 PRB4P10163 310 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ME2P23368 584 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 RORAP35398 523 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 QARSP47897 775 aaKnown RBP0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 FBXW12Q6X9E4 464 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TEX43Q6ZNM6 134 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 PEX26Q7Z412 305 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 PRSS58Q8IYP2 241 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 FAM133AQ8N9E0 248 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 DUS3LQ96G46 650 aaKnown RBP0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ZSCAN16Q9H4T2 348 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ADAP2Q9NPF8 381 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 C8orf17Q9NRJ1 99 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TMEM106BQ9NUM4 274 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 TAS2R1Q9NYW7 299 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 IL19Q9UHD0 177 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ADGRA3Q8IWK6 1321 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 NCAPD2Q15021 1401 aa0.29□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ANKRD12Q6UB98 2062 aa0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 A0A1W2PRQ8 180 aa0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 BTN3A3O00478 584 aa0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 IGLV3-25P01717 112 aa0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 ETS1P14921 441 aa0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 IDH2P48735 452 aaKnown RBP0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 YBEYP58557 167 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 OGDHQ02218 1023 aa0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 PJVKQ0ZLH3 352 aa0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 GANABQ14697 944 aaKnown RBP0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 MAD2L1BPQ15013 274 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1009P-201ENST00000390996 PLET1Q6UQ28 207 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms