RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 NUDT4Q9NZJ9 180 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 B4GALT7Q9UBV7 327 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 MRPS28Q9Y2Q9 187 aaKnown RBP5.39□□□□□ -1.55
TRAV35-201ENST00000390462 SIPA1L3O60292 1781 aaPredicted RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 VSTM2BA6NLU5 285 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 SRRM3A6NNA2 597 aaPredicted RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 RNF212BA8MTL3 300 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 E7ESA3 106 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 H3BN98 237 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 SOX15O60248 233 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 PRKNO60260 465 aaPredicted RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 ERLIN2O94905 339 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 NGFP01138 241 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 TSHBP01222 138 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 IGLV2-14P01704 120 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 EDN1P05305 212 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 HOXD4P09016 255 aaPredicted RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 SMIM10L1P0DMW3 83 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 ZNF12P17014 697 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 KDELR2P33947 212 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 DDOSTP39656 456 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 CEACAM3P40198 252 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 LEPP41159 167 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 TSFMP43897 325 aaKnown RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 PCYT1AP49585 367 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 CCR8P51685 355 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 FBXW4P57775 412 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 GPX6P59796 221 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 DSTNP60981 165 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 RND3P61587 244 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 PITPNAQ00169 270 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 ZNF154Q13106 437 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 MADCAM1Q13477 382 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 TRMT5Q32P41 509 aaKnown RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 VWA2Q5GFL6 755 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 COQ5Q5HYK3 327 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 TMEM31Q5JXX7 168 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 ZNF788Q6ZQV5 615 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 NUFIP2Q7Z417 695 aaKnown RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 YTHDF3Q7Z739 585 aaKnown RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 SETD3Q86TU7 594 aaPredicted RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 SLC16A11Q8NCK7 471 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 TRUB1Q8WWH5 349 aaKnown RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 DYRK2Q92630 601 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 RPEQ96AT9 228 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 PPP1R14BQ96C90 147 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 SMIM10Q96HG1 83 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 CELF6Q96J87 481 aaKnown RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 TIMM29Q9BSF4 260 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 CABLES2Q9BTV7 478 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 TMEM59Q9BXS4 323 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 DGCR6LQ9BY27 220 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 IL25Q9H293 177 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 PPDPFQ9H3Y8 114 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 TUBB1Q9H4B7 451 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 WDR54Q9H977 334 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 SIRT7Q9NRC8 400 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 AGPAT4Q9NRZ5 378 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 LNPEPQ9UIQ6 1025 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 NTNG1Q9Y2I2 539 aa5.38□□□□□ -1.55
TRAV35-201ENST00000390462 RCL1Q9Y2P8 373 aaKnown RBP5.38□□□□□ -1.55
TRAV35-201ENST00000390462 A0A1B0GTI1 187 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 FAM231BA6NCW3 169 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 TNFSF11O14788 317 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 KRT7P08729 469 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 SLC35E2BP0CK96 405 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 SDC1P18827 310 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 HOXA5P20719 270 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 IL12AP29459 219 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 FCGR2CP31995 323 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 PTH2RP49190 550 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 CRYBA2P53672 197 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 UBE2KP61086 200 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 ERVK11-1P61568 191 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 VBP1P61758 197 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 RBMS2Q15434 407 aaKnown RBP5.37□□□□□ -1.55
TRAV35-201ENST00000390462 TRIP6Q15654 476 aaKnown RBP5.37□□□□□ -1.55
TRAV35-201ENST00000390462 ZIC1Q15915 447 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 EXOC3L4Q17RC7 722 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 KCTD19Q17RG1 926 aaPredicted RBP5.37□□□□□ -1.55
TRAV35-201ENST00000390462 ECSCRQ19T08 205 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 PGGHGQ32M88 737 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 ZNF530Q6P9A1 599 aaPredicted RBP5.37□□□□□ -1.55
TRAV35-201ENST00000390462 CHMP1BQ7LBR1 199 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 UNC93AQ86WB7 457 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 ZNF547Q8IVP9 402 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 OR9A4Q8NGU2 314 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 OR4Q3Q8NH05 313 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 OR5K2Q8NHB8 316 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 SLC7A13Q8TCU3 470 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 MRAPQ8TCY5 172 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 TCTEX1D2Q8WW35 142 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 RAB3CQ96E17 227 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 FAIM2Q9BWQ8 316 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 RNF41Q9H4P4 317 aaPredicted RBP5.37□□□□□ -1.55
TRAV35-201ENST00000390462 GAREM1Q9H706 876 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 EBF2Q9HAK2 575 aa5.37□□□□□ -1.55
TRAV35-201ENST00000390462 ADARB2Q9NS39 739 aaKnown RBP5.37□□□□□ -1.55
TRAV35-201ENST00000390462 RMND1Q9NWS8 449 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms