RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 ULBP2Q9BZM5 246 aa18.1■□□□□ 0.49
TSSC4-203ENST00000380996 FGF20Q9NP95 211 aaPredicted RBP18.1■□□□□ 0.49
TSSC4-203ENST00000380996 DIMT1Q9UNQ2 313 aaKnown RBP18.1■□□□□ 0.49
TSSC4-203ENST00000380996 ZNF835Q9Y2P0 537 aa18.1■□□□□ 0.49
TSSC4-203ENST00000380996 COA3Q9Y2R0 106 aaPredicted RBP18.1■□□□□ 0.49
TSSC4-203ENST00000380996 EMC9Q9Y3B6 208 aa18.1■□□□□ 0.49
TSSC4-203ENST00000380996 MBD3L4A6NDZ8 208 aaPredicted RBP18.09■□□□□ 0.49
TSSC4-203ENST00000380996 MBD3L3A6NE82 208 aaPredicted RBP18.09■□□□□ 0.49
TSSC4-203ENST00000380996 MBD3L5A6NJ08 208 aaPredicted RBP18.09■□□□□ 0.49
TSSC4-203ENST00000380996 EIF4E1BA6NMX2 242 aaKnown RBP18.09■□□□□ 0.49
TSSC4-203ENST00000380996 SLC19A2O60779 497 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 SBK2P0C263 348 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 AGTR1P30556 359 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 GUCA1AP43080 201 aaPredicted RBP18.09■□□□□ 0.49
TSSC4-203ENST00000380996 ZNF133P52736 654 aaPredicted RBP18.09■□□□□ 0.49
TSSC4-203ENST00000380996 TUBA4AP68366 448 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 PIGFQ07326 219 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 ETFDHQ16134 617 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 EIF2S3LQ2VIR3 472 aaKnown RBP18.09■□□□□ 0.49
TSSC4-203ENST00000380996 RIPPLY2Q5TAB7 128 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 B3GNT6Q6ZMB0 384 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 GLB1L2Q8IW92 636 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 ZNF100Q8IYN0 542 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 SVOPQ8N4V2 548 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 OR4F15Q8NGB8 312 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 MBD3L2Q8NHZ7 208 aaPredicted RBP18.09■□□□□ 0.49
TSSC4-203ENST00000380996 NSMAFQ92636 917 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 APH1AQ96BI3 265 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 LINC00470Q9BZP3 86 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 SLCO5A1Q9H2Y9 848 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 CHCHD3Q9NX63 227 aaKnown RBP18.09■□□□□ 0.49
TSSC4-203ENST00000380996 COMMD3-BMI1R4GMX3 469 aa18.09■□□□□ 0.49
TSSC4-203ENST00000380996 KRT33AO76009 404 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 APOL3O95236 402 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 ATP6V1B1P15313 513 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 MYL12AP19105 171 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 C21orf33P30042 268 aaPredicted RBP18.08■□□□□ 0.49
TSSC4-203ENST00000380996 PER3P56645 1201 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 C10orf128Q5T292 105 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 TMEM154Q6P9G4 183 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 FAM214BQ7L5A3 538 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 C9orf106Q8NAJ2 232 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 ZNF511Q8NB15 262 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 ZFP3Q96NJ6 502 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 CDCA4Q9BXL8 241 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 ADGRL4Q9HBW9 690 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 VCX3AQ9NNX9 186 aa18.08■□□□□ 0.49
TSSC4-203ENST00000380996 ALPK2Q86TB3 2170 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 IGKV1D-43A0A0B4J1Z2 117 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 DHHO43323 396 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 CLPTM1O96005 669 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 MT-ND2P03891 347 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 HTR1AP08908 422 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 MRPL3P09001 348 aaKnown RBP18.08■□□□□ 0.48
TSSC4-203ENST00000380996 LAP3P28838 519 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 ZNF84P51523 738 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 ACTC1P68032 377 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 ACTA1P68133 377 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 HSF2Q03933 536 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 NFATC3Q12968 1075 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 RNLSQ5VYX0 342 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 RTL6Q6ICC9 239 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 SPARTQ8N0X7 666 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 ACBD7Q8N6N7 88 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 ST6GALNAC3Q8NDV1 305 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 SIGLEC11Q96RL6 698 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 INTS14Q96SY0 518 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 MARCH7Q9H992 704 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 INPP5EQ9NRR6 644 aa18.08■□□□□ 0.48
TSSC4-203ENST00000380996 EXOSC1Q9Y3B2 195 aaKnown RBP18.08■□□□□ 0.48
TSSC4-203ENST00000380996 UPK3AO75631 287 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 IL2RAP01589 272 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 HRGP04196 525 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 CRHP06850 196 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 SMIM18P0DKX4 95 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 TIMP3P35625 211 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 PHYHD1Q5SRE7 291 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 SHFQ7M4L6 423 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 SLC16A9Q7RTY1 509 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 NUFIP2Q7Z417 695 aaKnown RBP18.07■□□□□ 0.48
TSSC4-203ENST00000380996 DOLPP1Q86YN1 238 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 ERI1Q8IV48 349 aaKnown RBP18.07■□□□□ 0.48
TSSC4-203ENST00000380996 TIGD4Q8IY51 512 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 GCNT2Q8N0V5 402 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 RBM24Q9BX46 236 aaKnown RBP18.07■□□□□ 0.48
TSSC4-203ENST00000380996 JAM3Q9BX67 310 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 ERGIC3Q9Y282 383 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 FAM215AQ9Y5M1 114 aa18.07■□□□□ 0.48
TSSC4-203ENST00000380996 SPTA1P02549 2419 aa18.06■□□□□ 0.48
TSSC4-203ENST00000380996 KMT2BQ9UMN6 2715 aaPredicted RBP18.06■□□□□ 0.48
TSSC4-203ENST00000380996 PRRC2CQ9Y520 2896 aaKnown RBP18.06■□□□□ 0.48
TSSC4-203ENST00000380996 A0A1W2PPL8 197 aa18.06■□□□□ 0.48
TSSC4-203ENST00000380996 TVP23AA6NH52 213 aa18.06■□□□□ 0.48
TSSC4-203ENST00000380996 TRIM64CA6NLI5 447 aa18.06■□□□□ 0.48
TSSC4-203ENST00000380996 J3QRE1 110 aa18.06■□□□□ 0.48
TSSC4-203ENST00000380996 IGHA1P01876 353 aa18.06■□□□□ 0.48
TSSC4-203ENST00000380996 OR2T7P0C7T2 308 aa18.06■□□□□ 0.48
TSSC4-203ENST00000380996 ZNF823P16415 610 aa18.06■□□□□ 0.48
TSSC4-203ENST00000380996 NAA10P41227 235 aaPredicted RBP18.06■□□□□ 0.48
TSSC4-203ENST00000380996 CASP6P55212 293 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms