RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 NPIPA2E9PIF3 369 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 GPR32O75388 356 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 TBX6O95947 436 aaPredicted RBP8.55□□□□□ -1.04
PTPRA-204ENST00000380393 CD14P08571 375 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 C1SP09871 688 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 AQP2P41181 271 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 LBX1P52954 281 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 ST8SIA6P61647 398 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 RPS14P62263 151 aaKnown RBP8.55□□□□□ -1.04
PTPRA-204ENST00000380393 OLFML2AQ68BL7 652 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 DRAM2Q6UX65 266 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 SLC30A7Q8NEW0 376 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 STEAP2Q8NFT2 490 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 SCAMP5Q8TAC9 235 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 PSMG2Q969U7 264 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 POLR2J3Q9H1A7 115 aaKnown RBP8.55□□□□□ -1.04
PTPRA-204ENST00000380393 PCED1AQ9H1Q7 454 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 LRTM1Q9HBL6 345 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 FGF20Q9NP95 211 aaPredicted RBP8.55□□□□□ -1.04
PTPRA-204ENST00000380393 TMEM30AQ9NV96 361 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 PRUNE2Q8WUY3 3088 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 SMIM28A0A1B0GU29 152 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 CCSO14618 274 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 GPR39O43194 453 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 ALOX12BO75342 701 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 GCGP01275 180 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 CTXN2P0C2S0 81 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 GPX2P18283 190 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 THPOP40225 353 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 MTNR1AP48039 350 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 SLC22A25Q6T423 547 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 NUFIP2Q7Z417 695 aaKnown RBP8.55□□□□□ -1.04
PTPRA-204ENST00000380393 ZNF100Q8IYN0 542 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 GABRG1Q8N1C3 465 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 OR5D18Q8NGL1 313 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 PCED1BQ96HM7 432 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 SHDQ96IW2 340 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 SNX22Q96L94 193 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 MRGPRX1Q96LB2 322 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 OR2J1Q9GZK6 312 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 FOXJ3Q9UPW0 622 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 DSPPQ9NZW4 1301 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 MAGEB17A8MXT2 336 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 FAM157AC9JC47 383 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 GABARAPH6UMI1 98 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 XRCC3O43542 346 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 AMBPP02760 352 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 SOD2P04179 222 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 SERPINA2P20848 420 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 NT5EP21589 574 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ITPKBP27987 946 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ALDH3B1P43353 468 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 LILRA4P59901 499 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 IL2P60568 153 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ZXDBP98169 803 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 SRSF5Q13243 272 aaKnown RBP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ARL6IP1Q15041 203 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 KRTCAP3Q53RY4 240 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 LY6G6FQ5SQ64 297 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 MTSS1LQ765P7 747 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 TMPRSS11BQ86T26 416 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 OR4K2Q8NGD2 314 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 LIPHQ8WWY8 451 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 HAS2Q92819 552 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 HMCESQ96FZ2 354 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 GPR87Q9BY21 358 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 SLC25A51Q9H1U9 297 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 PLEKHA2Q9HB19 425 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 NCDNQ9UBB6 729 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 SCML2Q9UQR0 700 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 MYLKQ15746 1914 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 CYB5BO43169 146 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 FCGR3AP08637 254 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 SLC25A4P12235 298 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 HOXA11P31270 313 aaPredicted RBP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 TIAL1Q01085 375 aaKnown RBP eCLIP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ENPP7Q6UWV6 458 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 NDUFAF7Q7L592 441 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 OR5L2Q8NGL0 311 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 RNASEH2CQ8TDP1 164 aaKnown RBP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 FRZBQ92765 325 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 IMP4Q96G21 291 aaKnown RBP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 NUDT16L1Q9BRJ7 211 aaKnown RBP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ENPP4Q9Y6X5 453 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 A0A0G2JK05 382 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 SCDO00767 359 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 GPR182O15218 404 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 FLRT2O43155 660 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 DCNP07585 359 aaKnown RBP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 CXCL1P09341 107 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 STAG3L3P0CL85 134 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 HOXB9P17482 250 aaPredicted RBP8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ATF1P18846 271 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 HSD11B1P28845 292 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 LPAR6P43657 344 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ATP1B3P54709 279 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 ZNF343Q6P1L6 599 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 SMARCD3Q6STE5 483 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 LINGO4Q6UY18 593 aa8.54□□□□□ -1.04
PTPRA-204ENST00000380393 MRPL52Q86TS9 123 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms