RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SHC1P29353 583 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 EIF1P41567 113 aaKnown RBP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 OR10A3P58181 314 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 RAB4BP61018 213 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 MELKQ14680 651 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 HYAL4Q2M3T9 481 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 PYDC2Q56P42 97 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 ALG10Q5BKT4 473 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 C3orf38Q5JPI3 329 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF322Q6U7Q0 402 aaPredicted RBP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 SLC39A7Q92504 469 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 CMC2Q9NRP2 79 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 C14orf105Q9NVL8 296 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 SLC35A3Q9Y2D2 325 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 GSTK1Q9Y2Q3 226 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 A0A1W2PN81 502 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 C10orf142B7Z368 130 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 DCTN6O00399 190 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 GABRPO00591 440 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 RNF13O43567 381 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 CHRNA7P36544 502 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 EIF2S3P41091 472 aaKnown RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 GAS1P54826 345 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 BTBD16Q32M84 506 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 GLYR1Q49A26 553 aaPredicted RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 PMS2CLQ68D20 193 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SLC35D2Q76EJ3 337 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SELENOHQ8IZQ5 122 aaKnown RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF433Q8N7K0 673 aaPredicted RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SAP25Q8TEE9 199 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 ADAMTS14Q8WXS8 1223 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 TAAR8Q969N4 342 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SLC41A2Q96JW4 573 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 WDR77Q9BQA1 342 aaPredicted RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SYT4Q9H2B2 425 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 EXOSC1Q9Y3B2 195 aaKnown RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 A0A087WUJ7 227 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 MRPS14O60783 128 aaKnown RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SLC2A2P11168 524 aaPredicted RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SOX2P48431 317 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 GPR143P51810 404 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 EFNB1P98172 346 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF385CQ66K41 422 aaPredicted RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 TMPRSS11FQ6ZWK6 438 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 CEACAM19Q7Z692 300 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 RNF113BQ8IZP6 322 aaKnown RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 OR5W2Q8NH69 310 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 BRIX1Q8TDN6 353 aaKnown RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 ROBO4Q8WZ75 1007 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SLC30A2Q9BRI3 323 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 ARHGAP9Q9BRR9 750 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 PPIL3Q9H2H8 161 aaKnown RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SUSD2Q9UGT4 822 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 TMEM265A0A087WTH1 108 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 TCRBV16S1A1N1A0A5B0 115 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 EFSO43281 561 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 HPGDSO60760 199 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 OR2J2O76002 312 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 IGHEP01854 428 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SBK2P0C263 348 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SPNP16150 400 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 RAB3AP20336 220 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 IL11P20809 199 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 UQCRC1P31930 480 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 CDKN2AP42771 156 aaKnown RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 RPS18P62269 152 aaKnown RBP9.79□□□□□ -0.84
NEDD9-201ENST00000379433 SMCO1Q147U7 214 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF141Q15928 474 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 WBP2NLQ6ICG8 309 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 C1orf210Q8IVY1 113 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 BPIFCQ8NFQ6 507 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 THEM6Q8WUY1 208 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 OR2B2Q9GZK3 357 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 ACOXLQ9NUZ1 547 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 PILRBQ9UKJ0 227 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 HRH3Q9Y5N1 445 aa9.79□□□□□ -0.84
NEDD9-201ENST00000379433 TMEM72A0PK05 275 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 FABP12A6NFH5 140 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 SLC31A2O15432 143 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 HRGP04196 525 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 EPHA4P54764 986 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 RAB25P57735 213 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 SKP2Q13309 424 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 YIF1BQ5BJH7 314 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 DCXRQ7Z4W1 244 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 RDH10Q8IZV5 341 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 OR1N1Q8NGS0 311 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 OR6N2Q8NGY6 317 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 DNAJA4Q8WW22 397 aaPredicted RBP9.78□□□□□ -0.84
NEDD9-201ENST00000379433 NR4A3Q92570 626 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 ADIPOR1Q96A54 375 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 PFDN5Q99471 154 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 LPAR4Q99677 370 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 TMEM246Q9BRR3 403 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 ULBP3Q9BZM4 244 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 ARRDC1-AS1Q9H2J1 176 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 PCNX2A6NKB5 2137 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 IGKV1D-42A0A075B6H8 117 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 SLC22A31A6NKX4 558 aa9.78□□□□□ -0.84
NEDD9-201ENST00000379433 A8MV72 311 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms