RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 HIF3AQ9Y2N7 669 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 PRR14LQ5THK1 2151 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 CIB4A0PJX0 185 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 FTCDNL1E5RQL4 147 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 MPZL2O60487 215 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 CYTIPO60759 359 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 NDUFB2O95178 105 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 IGFBP1P08833 259 aaPredicted RBP12.08□□□□□ -0.48
PRPF18-202ENST00000378572 POU1F1P28069 291 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 RPS5P46782 204 aaKnown RBP12.08□□□□□ -0.48
PRPF18-202ENST00000378572 DIO1P49895 249 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 PRPS1P60891 318 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 TEKQ02763 1124 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 GINS1Q14691 196 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 UGT2A3Q6UWM9 527 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 TRUB1Q8WWH5 349 aaKnown RBP12.08□□□□□ -0.48
PRPF18-202ENST00000378572 MOGAT1Q96PD6 335 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 GPX7Q96SL4 187 aaPredicted RBP12.08□□□□□ -0.48
PRPF18-202ENST00000378572 REPIN1Q9BWE0 567 aaKnown RBP12.08□□□□□ -0.48
PRPF18-202ENST00000378572 TSSK6Q9BXA6 273 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 TEX12Q9BXU0 123 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 REG4Q9BYZ8 158 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 OR11A1Q9GZK7 315 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 SLCO5A1Q9H2Y9 848 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
PRPF18-202ENST00000378572 BAIAP2Q9UQB8 552 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 HDGFL3Q9Y3E1 203 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 CORINQ9Y5Q5 1042 aa12.08□□□□□ -0.48
PRPF18-202ENST00000378572 DPRXA6NFQ7 191 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 LRRN3E7EW58 273 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 ABCD4O14678 606 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 RAD51DO75771 328 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 SLC6A6P31641 620 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 CASP12Q6UXS9 341 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 C10orf53Q8N6V4 93 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 SCAIQ8N9R8 606 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 OR2T33Q8NG76 320 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 FAM81AQ8TBF8 368 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 SAMD8Q96LT4 415 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 TNFRSF13CQ96RJ3 184 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 NDEL1Q9GZM8 345 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 YAE1D1Q9NRH1 226 aa12.07□□□□□ -0.48
PRPF18-202ENST00000378572 NOSIPQ9Y314 301 aaKnown RBP12.07□□□□□ -0.48
PRPF18-202ENST00000378572 TRAV27A0A087WT01 109 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 BHLHE40O14503 412 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 RAMP1O60894 148 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 CRLF1O75462 422 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 IGHV4-39P01824 125 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 HMGN1P05114 100 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 DANCRP0C864 163 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 IGHV1-2P23083 117 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 GRK5P34947 590 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 IL5RAQ01344 420 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 CD47Q08722 323 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 MAD2L1BPQ15013 274 aaPredicted RBP12.06□□□□□ -0.48
PRPF18-202ENST00000378572 PGGHGQ32M88 737 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 FREM1Q5H8C1 2179 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 TMEM236Q5W0B7 351 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 ACSM5Q6NUN0 579 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 NANOGNBQ7Z5D8 188 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 ENTHD1Q8IYW4 607 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 LNX2Q8N448 690 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 LRRC17Q8N6Y2 441 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 OR5J2Q8NH18 312 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 OR52N5Q8NH56 324 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 OR51A7Q8NH64 312 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 RHOXF1Q8NHV9 184 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 APH1AQ96BI3 265 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 ARL5BQ96KC2 179 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 YTHDF1Q9BYJ9 559 aaKnown RBP12.06□□□□□ -0.48
PRPF18-202ENST00000378572 BARX1Q9HBU1 254 aaPredicted RBP12.06□□□□□ -0.48
PRPF18-202ENST00000378572 IMPAD1Q9NX62 359 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 MRPL39Q9NYK5 338 aaKnown RBP12.06□□□□□ -0.48
PRPF18-202ENST00000378572 GDF2Q9UK05 429 aaPredicted RBP12.06□□□□□ -0.48
PRPF18-202ENST00000378572 TRAPPC4Q9Y296 219 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 LIPT2A6NK58 231 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 ZNF724A8MTY0 619 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 OVOL3O00110 214 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 SSX4O60224 188 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 HIST1H2ABP04908 130 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 GABRB1P18505 474 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 EDNRAP25101 427 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 ZNF83P51522 516 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 CHN2P52757 468 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 NUDT6P53370 316 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 CXCR4P61073 352 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 SNRPGP62308 76 aaKnown RBP12.06□□□□□ -0.48
PRPF18-202ENST00000378572 TIMM23BQ5SRD1 257 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 SLC22A25Q6T423 547 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 THSD4Q6ZMP0 1018 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 TMPPEQ6ZT21 453 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 HIST3H2AQ7L7L0 130 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 LSRQ86X29 649 aaPredicted RBP12.06□□□□□ -0.48
PRPF18-202ENST00000378572 ADPRHL1Q8NDY3 354 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 OR8J1Q8NGP2 316 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 OR4Q3Q8NH05 313 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 HIST1H2ACQ93077 130 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 SLC38A2Q96QD8 506 aa12.06□□□□□ -0.48
PRPF18-202ENST00000378572 TRAF4Q9BUZ4 470 aaPredicted RBP12.06□□□□□ -0.48
PRPF18-202ENST00000378572 TAPBPLQ9BX59 468 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms