RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 OR4Q2P0C623 313 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 S100A4P26447 101 aaKnown RBP8.11□□□□□ -1.11
LIG3-202ENST00000378526 WNT7BP56706 349 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 CTBSQ01459 385 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 MANEALQ5VSG8 457 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 DTWD2Q8NBA8 298 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 OR9Q2Q8NGE9 314 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 OR13C6PQ8NH95 151 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 ZNF516Q92618 1163 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 OLAHQ9NV23 265 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 PAM16Q9Y3D7 125 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
LIG3-202ENST00000378526 MAP1LC3B2A6NCE7 125 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 CLDN5O00501 218 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 UTS2O95399 124 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 POU2F2P09086 479 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 MAML2Q8IZL2 1156 aaPredicted RBP8.11□□□□□ -1.11
LIG3-202ENST00000378526 ATG4CQ96DT6 458 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 MAP1LC3BQ9GZQ8 125 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 KIAA0556O60303 1618 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 CRB1P82279 1406 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 CBR3O75828 277 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 CA2P00918 260 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 RXRBP28702 533 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 SLC6A11P48066 632 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 GPR18Q14330 331 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 ELOCQ15369 112 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 GABRA6Q16445 453 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 TMEM102Q8N9M5 508 aaPredicted RBP8.11□□□□□ -1.11
LIG3-202ENST00000378526 OR14C36Q8NHC7 312 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 ZNF300Q96RE9 604 aaPredicted RBP8.11□□□□□ -1.11
LIG3-202ENST00000378526 CD84Q9UIB8 345 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 SLC7A7Q9UM01 511 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 DOCK10Q96BY6 2186 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 HECW2Q9P2P5 1572 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 A6NIN4 97 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 RNASET2O00584 256 aaKnown RBP8.11□□□□□ -1.11
LIG3-202ENST00000378526 C4BPAP04003 597 aaKnown RBP8.11□□□□□ -1.11
LIG3-202ENST00000378526 AKR1C3P42330 323 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 OR4D2P58180 307 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 GALNT2Q10471 571 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 SERTAD2Q14140 314 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 TAZQ16635 292 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 CPZQ66K79 652 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 PIM3Q86V86 326 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 C2orf15Q8WU43 125 aaKnown RBP8.11□□□□□ -1.11
LIG3-202ENST00000378526 AMDHD1Q96NU7 426 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 MS4A4EQ96PG1 132 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 GPR20Q99678 358 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 DEC1Q9P2X7 70 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 TAC3Q9UHF0 121 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 B3GALT5Q9Y2C3 310 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 ADAMTS13Q76LX8 1427 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 NME4O00746 187 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 CDS2O95674 445 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 TNFP01375 233 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 CHRM2P08172 466 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 DDTP30046 118 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 LIPAP38571 399 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 GDF10P55107 478 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 PAFAH1B2P68402 229 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 MIDNQ504T8 468 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 OR4B1Q8NGF8 309 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 OR10J5Q8NHC4 309 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 ADAT3Q96EY9 351 aaPredicted RBP8.11□□□□□ -1.11
LIG3-202ENST00000378526 PIPOXQ9P0Z9 390 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 MRPL42Q9Y6G3 142 aaKnown RBP8.11□□□□□ -1.11
LIG3-202ENST00000378526 TMEM2Q9UHN6 1383 aa8.11□□□□□ -1.11
LIG3-202ENST00000378526 TRPM6Q9BX84 2022 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 FBLL1A6NHQ2 334 aaKnown RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 LEFTY2O00292 366 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 C21orf33P30042 268 aaPredicted RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 DIO3P55073 304 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 PMCHL1Q16048 86 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 OR10A7Q8NGE5 316 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 TTC9Q92623 222 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 FBXW5Q969U6 566 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 UTP4Q969X6 686 aaKnown RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 SLC22A12Q96S37 553 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 PSORS1C1Q9UIG5 152 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 MOKQ9UQ07 419 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 KCNAB3O43448 404 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 SLC10A3P09131 477 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 CD1CP29017 333 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 TAS2R38P59533 333 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 KCNJ10P78508 379 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 SOWAHCQ53LP3 525 aaPredicted RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 TMEM183AQ8IXX5 376 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 RNF113BQ8IZP6 322 aaKnown RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 ZMYND19Q96E35 227 aaPredicted RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 ANGPTL4Q9BY76 406 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 IL36AQ9UHA7 158 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 KLF15Q9UIH9 416 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 DMRT1Q9Y5R6 373 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 SLC25A5P05141 298 aaKnown RBP8.1□□□□□ -1.11
LIG3-202ENST00000378526 CHRM4P08173 479 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 GNG4P50150 75 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 GHRHRQ02643 423 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 CXCL9Q07325 125 aa8.1□□□□□ -1.11
LIG3-202ENST00000378526 CYS1Q717R9 158 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms