RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CCL23P55773 120 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 LSM6P62312 80 aaKnown RBP10.83□□□□□ -0.68
NPHP4-202ENST00000378161 HSPB3Q12988 150 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 AGTRAPQ6RW13 159 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 ALKAL1Q6UXT8 129 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 ESPNLQ6ZVH7 1005 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 MAL2Q969L2 176 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 CIB3Q96Q77 187 aaPredicted RBP10.83□□□□□ -0.68
NPHP4-202ENST00000378161 SLCO5A1Q9H2Y9 848 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 EPHX3Q9H6B9 360 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 CERS4Q9HA82 394 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 APMAPQ9HDC9 416 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 GPR39O43194 453 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 COMPP49747 757 aaPredicted RBP10.83□□□□□ -0.68
NPHP4-202ENST00000378161 RGS8P57771 180 aaPredicted RBP10.83□□□□□ -0.68
NPHP4-202ENST00000378161 TSPAN31Q12999 210 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 TMEM91Q6ZNR0 172 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 GID4Q8IVV7 300 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF679Q8IYX0 411 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 CHST4Q8NCG5 386 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 OR1N1Q8NGS0 311 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 ADAMTS15Q8TE58 950 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 OR7D2Q96RA2 312 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 OR8B4Q96RC9 309 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 FAM83CQ9BQN1 747 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 CABLES2Q9BTV7 478 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 MRPL22Q9NWU5 206 aaKnown RBP10.83□□□□□ -0.68
NPHP4-202ENST00000378161 LPAR3Q9UBY5 353 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 ZNF780BQ9Y6R6 833 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 RIIAD1A6NNX1 92 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 C1QTNF3-AMACRE9PGA6 284 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 M0QZQ0 153 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 GABRR1P24046 479 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 CTHP32929 405 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 FCRLAQ7L513 359 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 C19orf47Q8N9M1 422 aaKnown RBP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 OR9K2Q8NGE7 335 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 TUBA4BQ9H853 241 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 OR52A1Q9UKL2 312 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 TBC1D3FA6NER0 549 aaPredicted RBP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 ADAP1O75689 374 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 SCGB1D2O95969 90 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 UBE2G2P60604 165 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 CD300LGQ6UXG3 332 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 ABHD12BQ7Z5M8 362 aaPredicted RBP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 GALNT16Q8N428 558 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 CELF5Q8N6W0 485 aaKnown RBP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 SMPDL3BQ92485 455 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 MS4A10Q96PG2 267 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 ADAM19Q9H013 955 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 CSAG2Q9Y5P2 127 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 COL16A1Q07092 1604 aaPredicted RBP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 TRAV18A0A075B6X5 111 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 A0A0A6YYC8 382 aaPredicted RBP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 I3L1I5 382 aaPredicted RBP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 LAMP1P11279 417 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 BCKDHBP21953 392 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 PRPF38BQ5VTL8 546 aaKnown RBP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 JMJD6Q6NYC1 403 aaPredicted RBP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 CATSPERDQ86XM0 798 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 OR52N4Q8NGI2 321 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 ARRDC2Q8TBH0 407 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 WDR92Q96MX6 357 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 SCGB3A2Q96PL1 93 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 PARP12Q9H0J9 701 aaKnown RBP10.82□□□□□ -0.68
NPHP4-202ENST00000378161 CHRNA9Q9UGM1 479 aa10.82□□□□□ -0.68
NPHP4-202ENST00000378161 GEMIN2O14893 280 aaKnown RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 NME2P1O60361 137 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 FGF19O95750 216 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 GSTP1P09211 210 aaKnown RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 HSD3B2P26439 372 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 PSMB6P28072 239 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 DLK1P80370 383 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 PLEKHS1Q5SXH7 462 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 MUC20Q8N307 709 aaPredicted RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 TSTD1Q8NFU3 115 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 SLC35G5Q96KT7 338 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 PBX4Q9BYU1 374 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 CLMPQ9H6B4 373 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 TBC1D3KA0A087X1G2 549 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 TMEM88BA6NKF7 163 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 ELOA3DA6NLF2 546 aaPredicted RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 CYR61O00622 381 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 GPRIN2O60269 458 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 LRP3O75074 770 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 OR2A4O95047 310 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 MPGP29372 298 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 YBX1P67809 324 aaKnown RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 HENMT1Q5T8I9 393 aaKnown RBP10.81□□□□□ -0.68
NPHP4-202ENST00000378161 Q6ZSR9 355 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 DMBX1Q8NFW5 382 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 OR5AK3PQ8NH89 298 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 OR2A7Q96R45 310 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 SMIM3Q9BZL3 60 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 SLC35B3Q9H1N7 401 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 YIPF1Q9Y548 306 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 STRCP1A6NGW2 1772 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 TRDCB7Z8K6 153 aa10.81□□□□□ -0.68
NPHP4-202ENST00000378161 CTNSO60931 367 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms