RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 GRINAQ7Z429 371 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 Q96M85 177 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 ST6GALNAC5Q9BVH7 336 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 WDR76Q9H967 626 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 YBX2Q9Y2T7 364 aaKnown RBP13.78□□□□□ -0.2
NPHP4-201ENST00000378156 C2orf72A6NCS6 295 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 H0YIG0 161 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 DDAH2O95865 285 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 LIPCP11150 499 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 BPIFB2Q8N4F0 458 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 TMEM99Q8N816 258 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 CPT1CQ8TCG5 803 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 MVB12AQ96EY5 273 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 CNRIP1Q96F85 164 aaPredicted RBP13.78□□□□□ -0.2
NPHP4-201ENST00000378156 TEAD3Q99594 435 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 SLC19A3Q9BZV2 496 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 OR51B6Q9H340 312 aa13.78□□□□□ -0.2
NPHP4-201ENST00000378156 FAM212BQ9NTI7 297 aaPredicted RBP13.78□□□□□ -0.2
NPHP4-201ENST00000378156 TMEM212A6NML5 194 aa13.77□□□□□ -0.2
NPHP4-201ENST00000378156 FADS1O60427 444 aa13.77□□□□□ -0.2
NPHP4-201ENST00000378156 GLB1P16278 677 aa13.77□□□□□ -0.2
NPHP4-201ENST00000378156 ACTBL2Q562R1 376 aa13.77□□□□□ -0.2
NPHP4-201ENST00000378156 C1orf140Q5VVS0 124 aa13.77□□□□□ -0.2
NPHP4-201ENST00000378156 FAM57BQ71RH2 274 aa13.77□□□□□ -0.2
NPHP4-201ENST00000378156 CCDC71Q8IV32 467 aaPredicted RBP13.77□□□□□ -0.2
NPHP4-201ENST00000378156 OR5L1Q8NGL2 311 aa13.77□□□□□ -0.2
NPHP4-201ENST00000378156 TMEM106AQ96A25 262 aa13.77□□□□□ -0.2
NPHP4-201ENST00000378156 FYTTD1Q96QD9 318 aaKnown RBP13.77□□□□□ -0.2
NPHP4-201ENST00000378156 NOX4Q9NPH5 578 aa13.77□□□□□ -0.2
NPHP4-201ENST00000378156 SERGEFQ9UGK8 458 aa13.77□□□□□ -0.2
NPHP4-201ENST00000378156 MED6O75586 246 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 CNOT4O95628 575 aaKnown RBP13.77□□□□□ -0.21
NPHP4-201ENST00000378156 FCN2Q15485 313 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 LRRC18Q8N456 261 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 BBS1Q8NFJ9 593 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 PPP1R35Q8TAP8 253 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 PIGQQ9BRB3 760 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 TCEAL2Q9H3H9 227 aaPredicted RBP13.77□□□□□ -0.21
NPHP4-201ENST00000378156 NRIP3Q9NQ35 241 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 GREB1LQ9C091 1923 aaPredicted RBP13.77□□□□□ -0.21
NPHP4-201ENST00000378156 LMO7DNF2Z398 122 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 M0R082 166 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 F10P00742 488 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 PPICP45877 212 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 GFERP55789 205 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 FXYD4P59646 89 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 BTG2P78543 158 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 FAM53BQ14153 422 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 ZMAT1Q5H9K5 638 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 MKXQ8IYA7 352 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 SLC7A6Q92536 515 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 SLIRPQ9GZT3 109 aaKnown RBP13.77□□□□□ -0.21
NPHP4-201ENST00000378156 BCL2L10Q9HD36 194 aa13.77□□□□□ -0.21
NPHP4-201ENST00000378156 MBD1Q9UIS9 605 aaPredicted RBP13.77□□□□□ -0.21
NPHP4-201ENST00000378156 TMEM82A0PJX8 343 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 KCNK2O95069 426 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 DBHP09172 617 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 HLA-DMAP28067 261 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 BTG1P62324 171 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 KCNIP4Q6PIL6 250 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 CA13Q8N1Q1 262 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 OR6F1Q8NGZ6 308 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 BORCS7Q96B45 105 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 PDCD1LG2Q9BQ51 273 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 POM121CA8CG34 1229 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 E9PI62 339 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 MT-ATP6P00846 226 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 CPEP16870 476 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 HTR5AP47898 357 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 CYB561P49447 251 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 DUSP8Q13202 625 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 FAM109BQ6ICB4 259 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-201ENST00000378156 SIAH3Q8IW03 269 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 OR9K2Q8NGE7 335 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 IFI44Q8TCB0 444 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 RNF141Q8WVD5 230 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 RASD2Q96D21 266 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 UQCC2Q9BRT2 126 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 PLA2G2FQ9BZM2 168 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 WSB2Q9NYS7 404 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-201ENST00000378156 TRIP12Q14669 1992 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-201ENST00000378156 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 ANKRD34BA5PLL1 514 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 TCRBP04435 133 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 HAS2Q92819 552 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 SBK2P0C263 348 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 S100A11P31949 105 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 SOX18P35713 384 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 ATP1B3P54709 279 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 CARD18P57730 90 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 RUNX2Q13950 521 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 SLC16A12Q6ZSM3 486 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 SAMD10Q9BYL1 202 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 NMNAT2Q9BZQ4 307 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 CDCP1Q9H5V8 836 aa13.76□□□□□ -0.21
NPHP4-201ENST00000378156 CCR6P51684 374 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
NPHP4-201ENST00000378156 FABP5Q01469 135 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 CD276Q5ZPR3 534 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 PXT1Q8NFP0 134 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms