RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 EPHA4P54764 986 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 LCN6P62502 163 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 STPG2Q8N412 459 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 VN1R2Q8NFZ6 395 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 BCL7CQ8WUZ0 217 aaPredicted RBP8.03□□□□□ -1.12
PCDH9-202ENST00000377865 SCMH1Q96GD3 660 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 TCTN2Q96GX1 697 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 SIRT3Q9NTG7 399 aaPredicted RBP8.03□□□□□ -1.12
PCDH9-202ENST00000377865 KLF15Q9UIH9 416 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 ACAD8Q9UKU7 415 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 YY2O15391 372 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 FCMRO60667 390 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 HBE1P02100 147 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 HOXB5P09067 269 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 RPA2P15927 270 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 ZNF43P17038 809 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 YPEL5P62699 121 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 UBE2IP63279 158 aaKnown RBP8.03□□□□□ -1.12
PCDH9-202ENST00000377865 EEF1A2Q05639 463 aaKnown RBP8.03□□□□□ -1.12
PCDH9-202ENST00000377865 AGERQ15109 404 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 ABHD12BQ7Z5M8 362 aaPredicted RBP8.03□□□□□ -1.12
PCDH9-202ENST00000377865 C19orf47Q8N9M1 422 aaKnown RBP8.03□□□□□ -1.12
PCDH9-202ENST00000377865 OR11H7Q8NGC8 314 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 OR9A4Q8NGU2 314 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 LHFPL5Q8TAF8 219 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 ZFPM2Q8WW38 1151 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 DNAJA3Q96EY1 480 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 CNRIP1Q96F85 164 aaPredicted RBP8.03□□□□□ -1.12
PCDH9-202ENST00000377865 CRB3Q9BUF7 120 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 JAM3Q9BX67 310 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 OR10A2Q9H208 303 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 C1orf198Q9H425 327 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 TM7SF3Q9NS93 570 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 STARD5Q9NSY2 213 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 HAO2Q9NYQ3 351 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 PRAMEF26H0Y7S4 382 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 CTNSO60931 367 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 BPNT1O95861 308 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 CD160O95971 181 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 IGHG1P01857 330 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 PSMB6P28072 239 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 PPT1P50897 306 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 TRMT12Q53H54 448 aaKnown RBP8.03□□□□□ -1.12
PCDH9-202ENST00000377865 TTLL10Q6ZVT0 673 aa8.03□□□□□ -1.12
PCDH9-202ENST00000377865 C9J4A7 227 aa8.02□□□□□ -1.12
PCDH9-202ENST00000377865 CTSLP07711 333 aa8.02□□□□□ -1.12
PCDH9-202ENST00000377865 LIMS1P48059 325 aa8.02□□□□□ -1.12
PCDH9-202ENST00000377865 RPL27P61353 136 aaKnown RBP8.02□□□□□ -1.12
PCDH9-202ENST00000377865 NSDHLQ15738 373 aa8.02□□□□□ -1.12
PCDH9-202ENST00000377865 CDKN3Q16667 212 aa8.02□□□□□ -1.12
PCDH9-202ENST00000377865 ZNF362Q5T0B9 420 aaPredicted RBP8.02□□□□□ -1.12
PCDH9-202ENST00000377865 PLPP7Q8NBV4 271 aa8.02□□□□□ -1.12
PCDH9-202ENST00000377865 CCDC54Q8NEL0 328 aa8.02□□□□□ -1.12
PCDH9-202ENST00000377865 Q96M85 177 aa8.02□□□□□ -1.12
PCDH9-202ENST00000377865 TOX2Q96NM4 488 aa8.02□□□□□ -1.12
PCDH9-202ENST00000377865 B3GALT1Q9Y5Z6 326 aa8.02□□□□□ -1.12
PCDH9-202ENST00000377865 PYCARD-AS1I3L0S3 204 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 SEMA4FO95754 770 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 PMP2P02689 132 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 SLC26A5P58743 744 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 PAN3Q58A45 887 aaKnown RBP8.02□□□□□ -1.13
PCDH9-202ENST00000377865 C11orf87Q6NUJ2 197 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 C12orf57Q99622 126 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 SMIM3Q9BZL3 60 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 C8orf33Q9H7E9 229 aaPredicted RBP8.02□□□□□ -1.13
PCDH9-202ENST00000377865 PPP1R3EQ9H7J1 279 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 IL21Q9HBE4 155 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 OBP2AQ9NY56 170 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 MMACHCQ9Y4U1 282 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 CPED1A4D0V7 1026 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 GJE1A6NN92 205 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 EIF4E2O60573 245 aaKnown RBP8.02□□□□□ -1.13
PCDH9-202ENST00000377865 OLFM2O95897 454 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 CAV2P51636 162 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 SLC25A1P53007 311 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 DEFB103AP81534 67 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 FAM27D1Q5T7N8 215 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 DMKNQ6E0U4 476 aaPredicted RBP8.02□□□□□ -1.13
PCDH9-202ENST00000377865 SLC35D2Q76EJ3 337 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 RCBTB1Q8NDN9 531 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 OR1J2Q8NGS2 313 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 TAS2R4Q9NYW5 299 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 SIGLEC7Q9Y286 467 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 EMC9Q9Y3B6 208 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 STRAPQ9Y3F4 350 aaKnown RBP8.02□□□□□ -1.13
PCDH9-202ENST00000377865 PLEKHM1Q9Y4G2 1056 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 COL4A5P29400 1685 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.02□□□□□ -1.13
PCDH9-202ENST00000377865 ALDH3B1P43353 468 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 RPL23AP62750 156 aaKnown RBP8.02□□□□□ -1.13
PCDH9-202ENST00000377865 RAB1AP62820 205 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 C2orf76Q3KRA6 126 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 LAIR1Q6GTX8 287 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 FAAP20Q6NZ36 180 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 CMTM1Q8IZ96 169 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 OR52B4Q8NGK2 314 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 TOMM40LQ969M1 308 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 SENP5Q96HI0 755 aaPredicted RBP8.02□□□□□ -1.13
PCDH9-202ENST00000377865 DERL3Q96Q80 235 aa8.02□□□□□ -1.13
PCDH9-202ENST00000377865 ULBP3Q9BZM4 244 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms