RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 C12orf10Q9HB07 376 aa11.96□□□□□ -0.49
ACTN1-202ENST00000376839 UBQLN4Q9NRR5 601 aa11.96□□□□□ -0.49
ACTN1-202ENST00000376839 NUP210LQ5VU65 1888 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 ARID1BQ8NFD5 2236 aaPredicted RBP11.96□□□□□ -0.5
ACTN1-202ENST00000376839 TCRBV16S1A1N1A0A5B0 115 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 HMSDA8MTL9 139 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 B4DGG1 531 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 TSPAN4O14817 238 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 UTS2O95399 124 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 ATF4P18848 351 aaPredicted RBP11.96□□□□□ -0.5
ACTN1-202ENST00000376839 CSF2RBP32927 897 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 NUP62P37198 522 aaPredicted RBP11.96□□□□□ -0.5
ACTN1-202ENST00000376839 PBX2P40425 430 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 EGR3Q06889 387 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 C2orf76Q3KRA6 126 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 PRR22Q8IZ63 422 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 ZBTB44Q8NCP5 570 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 OR6M1Q8NGM8 313 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 TNFAIP8L1Q8WVP5 186 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 GAL3ST1Q99999 423 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 NXF5Q9H1B4 397 aaKnown RBP11.96□□□□□ -0.5
ACTN1-202ENST00000376839 ELOVL3Q9HB03 270 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 TMEM138Q9NPI0 162 aa11.96□□□□□ -0.5
ACTN1-202ENST00000376839 EPOPA6NHQ4 379 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 CHURC1-FNTBB4DL54 471 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 C11orf98E9PRG8 122 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 TRIM77I1YAP6 450 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 SCDO00767 359 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 ZNF264O43296 627 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 ZNF432O94892 652 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 PNPP00491 289 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 RENP00797 406 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 IGF2P01344 180 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 PPP3CBP16298 524 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 BTN1A1Q13410 526 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 MEP1BQ16820 701 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 TMEM184AQ6ZMB5 413 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 C7orf61Q8IZ16 206 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 PLPP7Q8NBV4 271 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 ZNF563Q8TA94 476 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 SCARB1Q8WTV0 552 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 CCNL2Q96S94 520 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-202ENST00000376839 MAP3K3Q99759 626 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 EXOSC3Q9NQT5 275 aaKnown RBP11.95□□□□□ -0.5
ACTN1-202ENST00000376839 GMEB2Q9UKD1 530 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 GTF2A1LQ9UNN4 478 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 C17orf105B2RV13 164 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 PLGP00747 810 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-202ENST00000376839 AKAIN1P0CW23 69 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 MAZP56270 477 aaKnown RBP11.95□□□□□ -0.5
ACTN1-202ENST00000376839 RASGEF1BQ0VAM2 473 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 TOMM34Q15785 309 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-202ENST00000376839 EMC4Q5J8M3 183 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 B3GNTL1Q67FW5 361 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-202ENST00000376839 TSSK4Q6SA08 328 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 GSG1LQ6UXU4 331 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 CLEC1AQ8NC01 280 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 OTOSQ8NHW6 89 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 DUSP19Q8WTR2 217 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 FAM3DQ96BQ1 224 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 APMAPQ9HDC9 416 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 TAS2R8Q9NYW2 309 aa11.95□□□□□ -0.5
ACTN1-202ENST00000376839 CDV3Q9UKY7 258 aaKnown RBP11.95□□□□□ -0.5
ACTN1-202ENST00000376839 TRIOO75962 3097 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 TCRBV21S2A2A0A5A6 115 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 TPPPO94811 219 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 WNT11O96014 354 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 PRSS3P35030 304 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 SCAND1P57086 179 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 BAMBIQ13145 260 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 RAB11BQ15907 218 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 C4orf46Q504U0 113 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 C9orf50Q5SZB4 431 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 C11orf88Q6PI97 169 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 ADOQ96SZ5 270 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 TTYH1Q9H313 450 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-202ENST00000376839 EXO5Q9H790 373 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 MED9Q9NWA0 146 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 PRODH2Q9UF12 536 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 PRELID1Q9Y255 219 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 SLCO1B1Q9Y6L6 691 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 SLC22A23A1A5C7 686 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 OR5K4A6NMS3 321 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 NSA2O95478 260 aaKnown RBP11.94□□□□□ -0.5
ACTN1-202ENST00000376839 SEMA4FO95754 770 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 HLA-DQA2P01906 255 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 IGHV4-34P06331 123 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 MAOBP27338 520 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 RABIFP47224 123 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 CENPAP49450 140 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 SORDQ00796 357 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 ARHGAP40Q5TG30 622 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 ZNF660Q6AZW8 331 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-202ENST00000376839 STPG2Q8N412 459 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 OR8B4Q96RC9 309 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 ATG5Q9H1Y0 275 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 TMEM14AQ9Y6G1 99 aa11.94□□□□□ -0.5
ACTN1-202ENST00000376839 LOC100289279A0A1B0GTE1 492 aa11.93□□□□□ -0.5
ACTN1-202ENST00000376839 A8MXK9 166 aa11.93□□□□□ -0.5
ACTN1-202ENST00000376839 SLC17A2O00624 439 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms