RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 OR6T1Q8NGN1 323 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 ZNF75AQ96N20 296 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 XRCC3O43542 346 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 IL2RAP01589 272 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 OR13C7P0DN81 318 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 ZNF93P35789 620 aaPredicted RBP13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 KIR2DL3P43628 341 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 LIM2P55344 173 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 HSD17B7P56937 341 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 RPL22L1Q6P5R6 122 aaKnown RBP13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 NRARPQ7Z6K4 114 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 CELF2-AS1Q8N7Q2 184 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 WDR31Q8NA23 367 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 REEP6Q96HR9 211 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 RNF167Q9H6Y7 350 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 CSNK1G1Q9HCP0 422 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 SLC39A9Q9NUM3 307 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 TBC1D29Q9UFV1 150 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 LRP6O75581 1613 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 NAP1L6A6NFF2 107 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 OR6C76A6NM76 312 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 GABARAPH6UMI1 98 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 GABARAPO95166 117 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 RPS27P42677 84 aaKnown RBP13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 KCNIP4Q6PIL6 250 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 PGAP1Q75T13 922 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 OR51D1Q8NGF3 324 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 C17orf113A0A1B0GUU1 675 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 TCRBV3S1A0A5B6 114 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 SDHBP21912 280 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 TRIM23P36406 574 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 OR51A4Q8NGJ6 313 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 OR51A2Q8NGJ7 313 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 SIRPB1O00241 398 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 ONECUT2O95948 504 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 ELAVL4P26378 380 aaKnown RBP13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 TAS2R30P59541 319 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 MFGE8Q08431 387 aaPredicted RBP13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 GLIPR1L1Q6UWM5 242 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 SLCO4C1Q6ZQN7 724 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 UPRTQ96BW1 309 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 ZNF436Q9C0F3 470 aaPredicted RBP13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 C1orf123Q9NWV4 160 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 PRAMEF25A6NGN4 478 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 GPR137BO60478 399 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 APOA2P02652 100 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 PMPCAQ10713 525 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 CATR1Q13166 79 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 PDZD11Q5EBL8 140 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 LSMEM2Q8N112 164 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 NECAP1Q8NC96 275 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 OR1E3Q8WZA6 343 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 RNF170Q96K19 258 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 SEC22CQ9BRL7 303 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 SEMA4CQ9C0C4 833 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 HEYLQ9NQ87 328 aaPredicted RBP13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 FITM1A5D6W6 292 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 TMEM212A6NML5 194 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 TNFSF11O14788 317 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 SFXN4Q6P4A7 337 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 HSD17B11Q8NBQ5 300 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 BOD1Q96IK1 185 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 Q96M85 177 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 UHRF2Q96PU4 802 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 RSRP1Q9BUV0 290 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 CHODLQ9H9P2 273 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 CRLF2Q9HC73 371 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 SERTM2A0A1B0GWG4 89 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 SOX15O60248 233 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 PFN3P60673 137 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 FAM219BQ5XKK7 198 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 ENTHD1Q8IYW4 607 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 GPR78Q96P69 363 aa13.52□□□□□ -0.24
NOTCH4-201ENST00000375023 PCBP3P57721 371 aaKnown RBP13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 GPLD1P80108 840 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 RETREG3Q86VR2 466 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 LILRA2Q8N149 483 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 TVP23CQ96ET8 276 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 MS4A8Q9BY19 250 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 CHST8Q9H2A9 424 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 NRIP3Q9NQ35 241 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 PIGBOS1A0A0B4J2F0 54 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 TRAF3IP2O43734 574 aaPredicted RBP13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 DNAJB6O75190 326 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 PENKP01210 267 aaPredicted RBP13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 SMAD4Q13485 552 aaKnown RBP13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 OR8G1Q15617 311 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 ANGPTL5Q86XS5 388 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 OR56B1Q8NGI3 324 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 ZBP1Q9H171 429 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 P2RY12Q9H244 342 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 GLTPQ9NZD2 209 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 OR52A1Q9UKL2 312 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 LHX6Q9UPM6 363 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 POM121BA6NF01 834 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 APEX1P27695 318 aaKnown RBP13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 CSNK1G2P78368 415 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 BTG2P78543 158 aa13.52□□□□□ -0.25
NOTCH4-201ENST00000375023 SLC35G3Q8N808 338 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms