RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 IGHEP01854 428 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 TFPIP10646 304 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 AHCYP23526 432 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 PITPNAQ00169 270 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 SLC6A19Q695T7 634 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 TMEM53Q6P2H8 277 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 TMEM205Q6UW68 189 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 KCTD20Q7Z5Y7 419 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 EXD3Q8N9H8 876 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 PLPP5Q8NEB5 264 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 OR2T4Q8NH00 348 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 ZNF671Q8TAW3 534 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 CREB3L1Q96BA8 519 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 ADAD1Q96M93 576 aaKnown RBP14□□□□□ -0.17
CCDC40-202ENST00000374876 FYTTD1Q96QD9 318 aaKnown RBP14□□□□□ -0.17
CCDC40-202ENST00000374876 ABCG5Q9H222 651 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 ZCCHC4Q9H5U6 513 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 FKRPQ9H9S5 495 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 NOX4Q9NPH5 578 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 ZNF346Q9UL40 294 aaKnown RBP14□□□□□ -0.17
CCDC40-202ENST00000374876 ZNF281Q9Y2X9 895 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 KCNMB2Q9Y691 235 aa14□□□□□ -0.17
CCDC40-202ENST00000374876 A0A0B4J203 849 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 EIF4E2O60573 245 aaKnown RBP13.99□□□□□ -0.17
CCDC40-202ENST00000374876 TRIM3O75382 744 aaPredicted RBP13.99□□□□□ -0.17
CCDC40-202ENST00000374876 SRMP19623 302 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 SLC6A1P30531 599 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 BCL2A1Q16548 175 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 YIF1BQ5BJH7 314 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 HACD4Q5VWC8 232 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 UNQ9370/PRO34162Q6UXP9 181 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 KRT74Q7RTS7 529 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 OR1N1Q8NGS0 311 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 OMA1Q96E52 524 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 TSPAN32Q96QS1 320 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 ITPR1Q14643 2758 aa13.99□□□□□ -0.17
CCDC40-202ENST00000374876 A0A1W2PQD3 144 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 TMEM72A0PK05 275 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 FAM172BPA6NC97 362 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 ALG1L2C9J202 215 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 INMT-MINDY4F8WBC2 141 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 H7C1C5 153 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 TO15178 435 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 CDC40O60508 579 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCDC40-202ENST00000374876 TSPAN2O60636 221 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 SLC25A12O75746 678 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 RPP14O95059 124 aaKnown RBP13.98□□□□□ -0.17
CCDC40-202ENST00000374876 UBL3O95164 117 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 RENP00797 406 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 PGCP20142 388 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 RCVRNP35243 200 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 NANOS3P60323 173 aaKnown RBP13.98□□□□□ -0.17
CCDC40-202ENST00000374876 LCN6P62502 163 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 TOMM34Q15785 309 aaPredicted RBP13.98□□□□□ -0.17
CCDC40-202ENST00000374876 MESTQ5EB52 335 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 ZNF684Q5T5D7 378 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 GPR139Q6DWJ6 353 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 ANKRD37Q7Z713 158 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 NOXA1Q86UR1 476 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 SPATA2Q9UM82 520 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 MRPS7Q9Y2R9 242 aaKnown RBP13.98□□□□□ -0.17
CCDC40-202ENST00000374876 CACNG2Q9Y698 323 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 NUP210LQ5VU65 1888 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 NBEAQ8NFP9 2946 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 TRAV36DV7A0A075B6V5 113 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 ACOD1A6NK06 481 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 PRR32B1ATL7 298 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 PDCD5O14737 125 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 RGS13O14921 159 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 ZFPL1O95159 310 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 OR8G3PP0DMU2 310 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 GP1BBP13224 206 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 ABCD3P28288 659 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 CCL11P51671 97 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 LINC00303Q3SY05 128 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 DCAF10Q5QP82 559 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 BICRALQ6AI39 1079 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 CPEB2Q7Z5Q1 589 aaKnown RBP13.98□□□□□ -0.17
CCDC40-202ENST00000374876 TIGD4Q8IY51 512 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 YIPF7Q8N8F6 280 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 RPS4Y2Q8TD47 263 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 ZFP3Q96NJ6 502 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 IP6K3Q96PC2 410 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 ZNF160Q9HCG1 818 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 LAMP5Q9UJQ1 280 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 LHX6Q9UPM6 363 aa13.98□□□□□ -0.17
CCDC40-202ENST00000374876 ATMQ13315 3056 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 TVP23AA6NH52 213 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 A6NL46 340 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 OR6C76A6NM76 312 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 C17orf51A8MQB3 221 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 DCTN6O00399 190 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 YES1P07947 543 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 COX6A1P12074 109 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 ARSBP15848 533 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 AGFG1P52594 562 aaKnown RBP13.97□□□□□ -0.17
CCDC40-202ENST00000374876 CBFBQ13951 182 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 BAIAP2L2Q6UXY1 529 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 OR6V1Q8N148 313 aa13.97□□□□□ -0.17
CCDC40-202ENST00000374876 DNAJA3Q96EY1 480 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms